7c1z: Difference between revisions

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==ATP bound structure of Pseudouridine kinase (PUKI) from Arabidopsis thaliana==

== Structural highlights ==

<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7C1Z OCA]. For a guided tour on the structure components use [~~http~~://proteopedia.org/fgij/fg.htm?mol=7C1Z FirstGlance].

<table><tr><td colspan='2'>[[7c1z]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7C1Z OCA]. For a guided tour on the structure components use [https://proteopedia.org/fgij/fg.htm?mol=7C1Z FirstGlance].

</td></tr><tr id='resources'><td class="sblockLbl">Resources:</td><td class="sblockDat">[~~http~~://proteopedia.org/fgij/fg.htm?mol=7c1z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7c1z OCA], [~~http~~://pdbe.org/7c1z PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=7c1z RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/7c1z PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=7c1z ProSAT]</td></tr>

</td></tr><tr id='method'><td class="sblockLbl">[[Empirical_models|Method:]]</td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.0961704Å</td></tr>

<tr id='ligand'><td class="sblockLbl">[[Ligand|Ligands:]]</td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>

<tr id='resources'><td class="sblockLbl">Resources:</td><td class="sblockDat">[https://proteopedia.org/fgij/fg.htm?mol=7c1z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7c1z OCA], [https://pdbe.org/7c1z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7c1z RCSB], [https://www.ebi.ac.uk/pdbsum/7c1z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7c1z ProSAT]</td></tr>

</table>

== Function ==

[https://www.uniprot.org/uniprot/PUKI_ARATH PUKI_ARATH] Catalyzes the phosphorylation of pseudouridine to pseudouridine 5'-phosphate (PsiMP) (PubMed:31907295). Catalyzes the first step in a pseudouridine degradation pathway (PubMed:31907295). Acts together with the pseudouridine 5'-phosphate glycosidase PUMY in the peroxisome to prevent toxic pseudouridine monophosphate accumulation (PubMed:31907295).<ref>PMID:31907295</ref>

== References ==

__TOC__

</StructureSection>

[[Category: Arabidopsis thaliana]]

[[Category: Large Structures]]

[[Category: Kim SH]]

[[Category: Rhee S]]

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 ==ATP bound structure of Pseudouridine kinase (PUKI) from Arabidopsis thaliana==
-<StructureSection load='7c1z' size='340' side='right'caption='[[7c1z]]' scene=''>
+<StructureSection load='7c1z' size='340' side='right'caption='[[7c1z]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7C1Z OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=7C1Z FirstGlance]. <br>
+<table><tr><td colspan='2'>[[7c1z]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7C1Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7C1Z FirstGlance]. <br>
-</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=7c1z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7c1z OCA], [http://pdbe.org/7c1z PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=7c1z RCSB], [http://www.ebi.ac.uk/pdbsum/7c1z PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=7c1z ProSAT]</span></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.0961704&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7c1z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7c1z OCA], [https://pdbe.org/7c1z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7c1z RCSB], [https://www.ebi.ac.uk/pdbsum/7c1z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7c1z ProSAT]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/PUKI_ARATH PUKI_ARATH] Catalyzes the phosphorylation of pseudouridine to pseudouridine 5'-phosphate (PsiMP) (PubMed:31907295). Catalyzes the first step in a pseudouridine degradation pathway (PubMed:31907295). Acts together with the pseudouridine 5'-phosphate glycosidase PUMY in the peroxisome to prevent toxic pseudouridine monophosphate accumulation (PubMed:31907295).<ref>PMID:31907295</ref>
+== References ==
+<references/>
 __TOC__
 </StructureSection>
+[[Category: Arabidopsis thaliana]]
 [[Category: Large Structures]]
 [[Category: Kim SH]]
 [[Category: Rhee S]]