1hpg: Difference between revisions

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<StructureSection load='1hpg' size='340' side='right'caption='[[1hpg]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
<StructureSection load='1hpg' size='340' side='right'caption='[[1hpg]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1hpg]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"actinomyces_griseus"_krainsky_1914 "actinomyces griseus" krainsky 1914]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1HPG OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1HPG FirstGlance]. <br>
<table><tr><td colspan='2'>[[1hpg]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_griseus Streptomyces griseus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1HPG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1HPG FirstGlance]. <br>
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=BOC:TERT-BUTYL+HYDROGEN+CARBONATE'>BOC</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">sprE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1911 "Actinomyces griseus" Krainsky 1914])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BOC:TERT-BUTYL+HYDROGEN+CARBONATE'>BOC</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glutamyl_endopeptidase_II Glutamyl endopeptidase II], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.82 3.4.21.82] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1hpg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1hpg OCA], [https://pdbe.org/1hpg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1hpg RCSB], [https://www.ebi.ac.uk/pdbsum/1hpg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1hpg ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1hpg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1hpg OCA], [http://pdbe.org/1hpg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1hpg RCSB], [http://www.ebi.ac.uk/pdbsum/1hpg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1hpg ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/GLUP_STRGR GLUP_STRGR] Preferentially cleaves peptide bonds on the carboxyl-terminal side of glutamate.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hp/1hpg_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hp/1hpg_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Actinomyces griseus krainsky 1914]]
[[Category: Glutamyl endopeptidase II]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Birktoft, J J]]
[[Category: Streptomyces griseus]]
[[Category: Nienaber, V L]]
[[Category: Birktoft JJ]]
[[Category: Hydrolase-hydrolase inhibitor complex]]
[[Category: Nienaber VL]]
[[Category: Serine protease]]