5ym3: Difference between revisions

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<StructureSection load='5ym3' size='340' side='right'caption='[[5ym3]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
<StructureSection load='5ym3' size='340' side='right'caption='[[5ym3]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5ym3]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Chinese_sage Chinese sage]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5YM3 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5YM3 FirstGlance]. <br>
<table><tr><td colspan='2'>[[5ym3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Salvia_miltiorrhiza Salvia miltiorrhiza]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5YM3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5YM3 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=PIM:4-PHENYL-1H-IMIDAZOLE'>PIM</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.601&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[5ylw|5ylw]]</div></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=PIM:4-PHENYL-1H-IMIDAZOLE'>PIM</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CYP76AH1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=226208 Chinese sage])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ym3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ym3 OCA], [https://pdbe.org/5ym3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ym3 RCSB], [https://www.ebi.ac.uk/pdbsum/5ym3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ym3 ProSAT]</span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ferruginol_synthase Ferruginol synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.14.13.190 1.14.13.190] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5ym3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ym3 OCA], [http://pdbe.org/5ym3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ym3 RCSB], [http://www.ebi.ac.uk/pdbsum/5ym3 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ym3 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/CYPH1_SALMI CYPH1_SALMI]] Cytochrome P450 enzyme (CYP) which catalyzes a unique two-electron oxidation cascade on abieta-8,11,13-triene to produce ferruginol, an intermediate in tanshinone biosynthesis.<ref>PMID:23812755</ref>
[https://www.uniprot.org/uniprot/CYPH1_SALMI CYPH1_SALMI] Cytochrome P450 enzyme (CYP) which catalyzes a unique two-electron oxidation cascade on abieta-8,11,13-triene to produce ferruginol, an intermediate in tanshinone biosynthesis.<ref>PMID:23812755</ref>  
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Chinese sage]]
[[Category: Ferruginol synthase]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Chang, Z]]
[[Category: Salvia miltiorrhiza]]
[[Category: Biosynthetic protein]]
[[Category: Chang Z]]
[[Category: Inhibitor]]
[[Category: Oxidoreductase]]
[[Category: P450]]

Latest revision as of 12:53, 13 August 2026

CYP76AH1-4pi from salvia miltiorrhiza

5ym3, resolution 2.60Å

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