2eq7: Difference between revisions
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<StructureSection load='2eq7' size='340' side='right'caption='[[2eq7]], [[Resolution|resolution]] 1.80Å' scene=''> | <StructureSection load='2eq7' size='340' side='right'caption='[[2eq7]], [[Resolution|resolution]] 1.80Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2eq7]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/ | <table><tr><td colspan='2'>[[2eq7]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. The October 2012 RCSB PDB [https://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Citric Acid Cycle'' by David Goodsell is [https://dx.doi.org/10.2210/rcsb_pdb/mom_2012_10 10.2210/rcsb_pdb/mom_2012_10]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EQ7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EQ7 FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> | ||
<tr id=' | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2eq7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eq7 OCA], [https://pdbe.org/2eq7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2eq7 RCSB], [https://www.ebi.ac.uk/pdbsum/2eq7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2eq7 ProSAT], [https://www.topsan.org/Proteins/RSGI/2eq7 TOPSAN]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2eq7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eq7 OCA], [https://pdbe.org/2eq7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2eq7 RCSB], [https://www.ebi.ac.uk/pdbsum/2eq7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2eq7 ProSAT], [https://www.topsan.org/Proteins/RSGI/2eq7 TOPSAN]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
[https://www.uniprot.org/uniprot/Q5SLK5_THET8 Q5SLK5_THET8] The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) (By similarity).[RuleBase:RU361138] | |||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eq/2eq7_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eq/2eq7_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Citric Acid Cycle]] | [[Category: Citric Acid Cycle]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: RCSB PDB Molecule of the Month]] | [[Category: RCSB PDB Molecule of the Month]] | ||
[[Category: | [[Category: Thermus thermophilus HB8]] | ||
[[Category: Kamiya | [[Category: Kamiya N]] | ||
[[Category: Nakai | [[Category: Nakai T]] | ||
Latest revision as of 07:36, 9 October 2024
Crystal structure of lipoamide dehydrogenase from thermus thermophilus HB8 with psbdo
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