1ijd: Difference between revisions

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== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1ijd]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodoblastus_acidophilus Rhodoblastus acidophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IJD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1IJD FirstGlance]. <br>
<table><tr><td colspan='2'>[[1ijd]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodoblastus_acidophilus Rhodoblastus acidophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IJD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1IJD FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BCL:BACTERIOCHLOROPHYLL+A'>BCL</scene>, <scene name='pdbligand=BOG:B-OCTYLGLUCOSIDE'>BOG</scene>, <scene name='pdbligand=RPA:RHODOPINAL+GLUCOSIDE'>RPA</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=FME:N-FORMYLMETHIONINE'>FME</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BOG:B-OCTYLGLUCOSIDE'>BOG</scene>, <scene name='pdbligand=FME:N-FORMYLMETHIONINE'>FME</scene>, <scene name='pdbligand=RPA:RHODOPINAL+GLUCOSIDE'>RPA</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1kzu|1kzu]], [[1lgh|1lgh]]</div></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ijd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ijd OCA], [https://pdbe.org/1ijd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ijd RCSB], [https://www.ebi.ac.uk/pdbsum/1ijd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ijd ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ijd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ijd OCA], [https://pdbe.org/1ijd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ijd RCSB], [https://www.ebi.ac.uk/pdbsum/1ijd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ijd ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/LHA1_RHOAC LHA1_RHOAC]] Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. [[https://www.uniprot.org/uniprot/LHB1_RHOAC LHB1_RHOAC]] Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.  
[https://www.uniprot.org/uniprot/LHA1_RHOAC LHA1_RHOAC] Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ij/1ijd_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ij/1ijd_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Rhodoblastus acidophilus]]
[[Category: Rhodoblastus acidophilus]]
[[Category: Cogdell, R J]]
[[Category: Cogdell RJ]]
[[Category: Isaacs, N W]]
[[Category: Isaacs NW]]
[[Category: McLuskey, K]]
[[Category: McLuskey K]]
[[Category: Prince, S M]]
[[Category: Prince SM]]
[[Category: Alpha-helix apoprotein]]
[[Category: Intergral membrane protein]]
[[Category: Light harvesting]]
[[Category: Photosynthesis]]
[[Category: Pigment-protein complex]]

Latest revision as of 08:31, 6 November 2024

Crystallographic Structure of the LH3 Complex from Rhodopseudomonas acidophila strain 7050

1ijd, resolution 3.00Å

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