1qmo: Difference between revisions
From Proteopedia
Jump to navigationJump to search
No edit summary |
No edit summary |
||
| (2 intermediate revisions by the same user not shown) | |||
| Line 3: | Line 3: | ||
<StructureSection load='1qmo' size='340' side='right'caption='[[1qmo]], [[Resolution|resolution]] 3.50Å' scene=''> | <StructureSection load='1qmo' size='340' side='right'caption='[[1qmo]], [[Resolution|resolution]] 3.50Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[1qmo]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/ | <table><tr><td colspan='2'>[[1qmo]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Lablab_purpureus Lablab purpureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QMO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1QMO FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr> | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.5Å</td></tr> | ||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1qmo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qmo OCA], [https://pdbe.org/1qmo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1qmo RCSB], [https://www.ebi.ac.uk/pdbsum/1qmo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1qmo ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1qmo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qmo OCA], [https://pdbe.org/1qmo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1qmo RCSB], [https://www.ebi.ac.uk/pdbsum/1qmo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1qmo ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/FRIL_LABPU FRIL_LABPU] Mannose-binding lectin (PubMed:9892687). Accommodates most effectively a non-reducing terminal alpha-d-mannosyl unit. Strongly precipitates murine IgM but not IgG (PubMed:9949194).<ref>PMID:9892687</ref> <ref>PMID:9949194</ref> | |||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
| Line 12: | Line 15: | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qm/1qmo_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qm/1qmo_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| Line 33: | Line 36: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Lablab purpureus]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Chrispeels | [[Category: Chrispeels M]] | ||
[[Category: Hamelryck | [[Category: Hamelryck TW]] | ||
[[Category: Loris | [[Category: Loris R]] | ||
[[Category: Moore | [[Category: Moore JG]] | ||
[[Category: Wyns | [[Category: Wyns L]] | ||
Latest revision as of 08:07, 4 March 2026
Structure of FRIL, a legume lectin that delays hematopoietic progenitor maturation
| ||||||||||||
