2oif: Difference between revisions

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<StructureSection load='2oif' size='340' side='right'caption='[[2oif]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
<StructureSection load='2oif' size='340' side='right'caption='[[2oif]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2oif]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Barley Barley]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OIF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OIF FirstGlance]. <br>
<table><tr><td colspan='2'>[[2oif]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Hordeum_vulgare Hordeum vulgare]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OIF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OIF FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CYN:CYANIDE+ION'>CYN</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=PGO:S-1,2-PROPANEDIOL'>PGO</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">HB, GLB1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4513 Barley])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CYN:CYANIDE+ION'>CYN</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=PGO:S-1,2-PROPANEDIOL'>PGO</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2oif FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oif OCA], [https://pdbe.org/2oif PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2oif RCSB], [https://www.ebi.ac.uk/pdbsum/2oif PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2oif ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2oif FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oif OCA], [https://pdbe.org/2oif PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2oif RCSB], [https://www.ebi.ac.uk/pdbsum/2oif PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2oif ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/HBL_HORVU HBL_HORVU]] May not function as an oxygen storage or transport protein, but might act as an oxygen sensor or play a role in electron transfer, possibly to a bound oxygen molecule.  
[https://www.uniprot.org/uniprot/HBL_HORVU HBL_HORVU] May not function as an oxygen storage or transport protein, but might act as an oxygen sensor or play a role in electron transfer, possibly to a bound oxygen molecule.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oi/2oif_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oi/2oif_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Barley]]
[[Category: Hordeum vulgare]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Hoy, J A]]
[[Category: Hoy JA]]
[[Category: Conformational change]]
[[Category: Evolution]]
[[Category: Hexacoordinate hemoglobin]]
[[Category: Ligand binding]]
[[Category: Metal binding protein]]
[[Category: Non-symbiotic]]
[[Category: Oxygen transport]]
[[Category: Symbiotic]]

Latest revision as of 08:25, 13 August 2026

The crystal structure of ferric cyanide bound barley hexacoordinate hemoglobin.

2oif, resolution 1.80Å

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