2qdk: Difference between revisions

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<StructureSection load='2qdk' size='340' side='right'caption='[[2qdk]], [[Resolution|resolution]] 1.62&Aring;' scene=''>
<StructureSection load='2qdk' size='340' side='right'caption='[[2qdk]], [[Resolution|resolution]] 1.62&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2qdk]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_typhimurium Salmonella typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QDK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QDK FirstGlance]. <br>
<table><tr><td colspan='2'>[[2qdk]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QDK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QDK FirstGlance]. <br>
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">udp ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=90371 Salmonella typhimurium])</td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.62&#8491;</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Uridine_phosphorylase Uridine phosphorylase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.3 2.4.2.3] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qdk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qdk OCA], [https://pdbe.org/2qdk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qdk RCSB], [https://www.ebi.ac.uk/pdbsum/2qdk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qdk ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qdk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qdk OCA], [https://pdbe.org/2qdk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qdk RCSB], [https://www.ebi.ac.uk/pdbsum/2qdk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qdk ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/UDP_SALTY UDP_SALTY]] Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis (By similarity).  
[https://www.uniprot.org/uniprot/UDP_SALTY UDP_SALTY] Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Salmonella typhimurium]]
[[Category: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]]
[[Category: Uridine phosphorylase]]
[[Category: Gabdoulkhakov AG]]
[[Category: Gabdoulkhakov, A G]]
[[Category: Lashkov AA]]
[[Category: Lashkov, A A]]
[[Category: Mikhailov AM]]
[[Category: Mikhailov, A M]]
[[Category: Pavlyuk BP]]
[[Category: Pavlyuk, B P]]
[[Category: Timofeev VI]]
[[Category: Timofeev, V I]]
[[Category: Nucleoside phosphorylase]]
[[Category: Transferase]]

Latest revision as of 09:15, 21 February 2024

X-ray structure of the unliganded uridine phosphorylase from Salmonella typhimurium at 1.62A resolution

2qdk, resolution 1.62Å

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