7dgi: Difference between revisions

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~~'''Unreleased structure'''~~

~~The entry 7dgi is ON HOLD until Paper Publication~~

==The co-crystal structure of SARS-CoV-2 main protease with peptidomimetic inhibitor N-((S)-3-methyl-1-(((S)-4-methyl-1-oxo-1-(((S)-1-oxo-3-((S)-2-oxopiperidin-3-yl)propan-2-yl)amino)pentan-2-yl)amino)-1-oxobutan-2-yl)-4-nitrobenzamide==

~~Authors: Shang, L.Q., Wang, H.~~

== Structural highlights ==

<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DGI OCA]. For a guided tour on the structure components use [https://proteopedia.org/fgij/fg.htm?mol=7DGI FirstGlance].

~~Description:~~ The co-crystal structure of SARS-CoV-2 main protease with peptidomimetic inhibitor N-((S)-3-methyl-1-(((S)-4-methyl-1-oxo-1-(((S)-1-oxo-3-((S)-2-oxopiperidin-3-yl)propan-2-yl)amino)pentan-2-yl)amino)-1-oxobutan-2-yl)-4-nitrobenzamide

</td></tr><tr id='method'><td class="sblockLbl">[[Empirical_models|Method:]]</td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.898Å</td></tr>

[[Category: ~~Unreleased~~ Structures]]

<tr id='ligand'><td class="sblockLbl">[[Ligand|Ligands:]]</td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=H6L:~{N}-[(2~{S})-3-methyl-1-[[(2~{S})-4-methyl-1-oxidanylidene-1-[[(2~{S})-1-oxidanylidene-3-[(3~{S})-2-oxidanylidenepiperidin-3-yl]propan-2-yl]amino]pentan-2-yl]amino]-1-oxidanylidene-butan-2-yl]-4-nitro-benzamide'>H6L</scene></td></tr>

[[Category: Shang~~, L.Q~~]]

<tr id='resources'><td class="sblockLbl">Resources:</td><td class="sblockDat">[https://proteopedia.org/fgij/fg.htm?mol=7dgi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dgi OCA], [https://pdbe.org/7dgi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dgi RCSB], [https://www.ebi.ac.uk/pdbsum/7dgi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dgi ProSAT]</td></tr>

[[Category: Wang, H]]

</table>

__TOC__

</StructureSection>

[[Category: Large Structures]]

[[Category: Shang LQ]]

[[Category: Wang H]]

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@@ Line 1: / Line 1: @@
-'''Unreleased structure'''
-The entry 7dgi is ON HOLD  until Paper Publication
+==The co-crystal structure of SARS-CoV-2 main protease with peptidomimetic inhibitor N-((S)-3-methyl-1-(((S)-4-methyl-1-oxo-1-(((S)-1-oxo-3-((S)-2-oxopiperidin-3-yl)propan-2-yl)amino)pentan-2-yl)amino)-1-oxobutan-2-yl)-4-nitrobenzamide==
+<StructureSection load='7dgi' size='340' side='right'caption='[[7dgi]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-Authors: Shang, L.Q., Wang, H.
+== Structural highlights ==
+<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DGI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DGI FirstGlance]. <br>
-Description: The co-crystal structure of SARS-CoV-2 main protease with peptidomimetic inhibitor N-((S)-3-methyl-1-(((S)-4-methyl-1-oxo-1-(((S)-1-oxo-3-((S)-2-oxopiperidin-3-yl)propan-2-yl)amino)pentan-2-yl)amino)-1-oxobutan-2-yl)-4-nitrobenzamide
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.898&#8491;</td></tr>
-[[Category: Unreleased Structures]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=H6L:~{N}-[(2~{S})-3-methyl-1-[[(2~{S})-4-methyl-1-oxidanylidene-1-[[(2~{S})-1-oxidanylidene-3-[(3~{S})-2-oxidanylidenepiperidin-3-yl]propan-2-yl]amino]pentan-2-yl]amino]-1-oxidanylidene-butan-2-yl]-4-nitro-benzamide'>H6L</scene></td></tr>
-[[Category: Shang, L.Q]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dgi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dgi OCA], [https://pdbe.org/7dgi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dgi RCSB], [https://www.ebi.ac.uk/pdbsum/7dgi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dgi ProSAT]</span></td></tr>
-[[Category: Wang, H]]
+</table>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
+[[Category: Shang LQ]]
+[[Category: Wang H]]