1w1b: Difference between revisions

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<StructureSection load='1w1b' size='340' side='right'caption='[[1w1b]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
<StructureSection load='1w1b' size='340' side='right'caption='[[1w1b]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1w1b]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"vibrio_subtilis"_ehrenberg_1835 "vibrio subtilis" ehrenberg 1835]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1W1B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1W1B FirstGlance]. <br>
<table><tr><td colspan='2'>[[1w1b]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1W1B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1W1B FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1ny1|1ny1]], [[1w17|1w17]], [[1w1a|1w1a]]</div></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1w1b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1w1b OCA], [https://pdbe.org/1w1b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1w1b RCSB], [https://www.ebi.ac.uk/pdbsum/1w1b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1w1b ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1w1b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1w1b OCA], [https://pdbe.org/1w1b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1w1b RCSB], [https://www.ebi.ac.uk/pdbsum/1w1b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1w1b ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/PDAA_BACSU PDAA_BACSU] Catalyzes the deacetylation of N-acetylmuramic acid (MurNAc) residues in glycan strands of peptidoglycan, leading to the formation of muramic delta-lactam residues in spore cortex, after transpeptidation of deacetylated muramic acid residues. PdaA probably carries out both deacetylation and lactam ring formation and requires the product of CwlD activity on peptidoglycan as a substrate. Is required for germination. Cannot use chitin oligomer (hexa-N-acetylchitohexaose) as a substrate.<ref>PMID:12374835</ref> <ref>PMID:14679227</ref> <ref>PMID:15687192</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Vibrio subtilis ehrenberg 1835]]
[[Category: Bacillus subtilis]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Aalten, D M.F van]]
[[Category: Blair DE]]
[[Category: Blair, D E]]
[[Category: Van Aalten DMF]]
[[Category: Deacetylase]]
[[Category: Family 4 carbohydrate esterase]]
[[Category: Hydrolase]]
[[Category: Nodb homology domain]]
[[Category: Peptidoglycan]]
[[Category: Sporulation]]