3har: Difference between revisions

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<StructureSection load='3har' size='340' side='right'caption='[[3har]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
<StructureSection load='3har' size='340' side='right'caption='[[3har]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3har]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_halobius_ruber"_klebahn_1919 "bacillus halobius ruber" klebahn 1919]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HAR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HAR FirstGlance]. <br>
<table><tr><td colspan='2'>[[3har]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Halobacterium_salinarum Halobacterium salinarum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HAR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HAR FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CPS:3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE'>CPS</scene>, <scene name='pdbligand=RET:RETINAL'>RET</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3han|3han]], [[3hao|3hao]], [[3hap|3hap]], [[3haq|3haq]], [[3has|3has]]</div></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CPS:3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE'>CPS</scene>, <scene name='pdbligand=RET:RETINAL'>RET</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">bop, VNG_1467G ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2242 "Bacillus halobius ruber" Klebahn 1919])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3har FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3har OCA], [https://pdbe.org/3har PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3har RCSB], [https://www.ebi.ac.uk/pdbsum/3har PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3har ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3har FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3har OCA], [https://pdbe.org/3har PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3har RCSB], [https://www.ebi.ac.uk/pdbsum/3har PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3har ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/BACR_HALSA BACR_HALSA]] Light-driven proton pump.  
[https://www.uniprot.org/uniprot/BACR_HALSA BACR_HALSA] Light-driven proton pump.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ha/3har_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ha/3har_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Bacillus halobius ruber klebahn 1919]]
[[Category: Halobacterium salinarum]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Bowie, J U]]
[[Category: Bowie JU]]
[[Category: Joh, N H]]
[[Category: Joh NH]]
[[Category: Yang, D]]
[[Category: Yang D]]
[[Category: Bacteriorhodopsin]]
[[Category: Cell membrane]]
[[Category: Chromophore]]
[[Category: Evolutionary constraint]]
[[Category: Helical membrane protein]]
[[Category: Hydrogen ion transport]]
[[Category: Integral membrane protein]]
[[Category: Ion transport]]
[[Category: Membrane]]
[[Category: Membrane protein]]
[[Category: Packing force]]
[[Category: Photoreceptor protein]]
[[Category: Proton transport]]
[[Category: Pyrrolidone carboxylic acid]]
[[Category: Receptor]]
[[Category: Retinal protein]]
[[Category: Sensory transduction]]
[[Category: Transmembrane]]
[[Category: Transport]]
[[Category: Transport protein]]
[[Category: Van der waal]]

Latest revision as of 06:16, 27 November 2024

Crystal structure of bacteriorhodopsin mutant I148V crystallized from bicelles

3har, resolution 1.70Å

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