2w5u: Difference between revisions

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<StructureSection load='2w5u' size='340' side='right'caption='[[2w5u]], [[Resolution|resolution]] 2.62&Aring;' scene=''>
<StructureSection load='2w5u' size='340' side='right'caption='[[2w5u]], [[Resolution|resolution]] 2.62&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2w5u]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_43504 Atcc 43504]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W5U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2W5U FirstGlance]. <br>
<table><tr><td colspan='2'>[[2w5u]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori Helicobacter pylori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W5U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2W5U FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=IC3:[2-(5-AMINO-4-CYANO-1H-PYRAZOL-1-YL)-5-(TRIFLUOROMETHYL)PHENYL](HYDROXY)OXOAMMONIUM'>IC3</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.62&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2bmv|2bmv]]</div></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=IC3:[2-(5-AMINO-4-CYANO-1H-PYRAZOL-1-YL)-5-(TRIFLUOROMETHYL)PHENYL](HYDROXY)OXOAMMONIUM'>IC3</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2w5u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w5u OCA], [https://pdbe.org/2w5u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2w5u RCSB], [https://www.ebi.ac.uk/pdbsum/2w5u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2w5u ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2w5u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w5u OCA], [https://pdbe.org/2w5u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2w5u RCSB], [https://www.ebi.ac.uk/pdbsum/2w5u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2w5u ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/FLAV_HELPY FLAV_HELPY]] Low-potential electron donor to a number of redox enzymes (By similarity).  
[https://www.uniprot.org/uniprot/FLAV_HELPY FLAV_HELPY] Low-potential electron donor to a number of redox enzymes (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w5/2w5u_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w5/2w5u_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Atcc 43504]]
[[Category: Helicobacter pylori]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Cremades, N]]
[[Category: Cremades N]]
[[Category: Hermoso, J A]]
[[Category: Hermoso JA]]
[[Category: Martinez-Julvez, M]]
[[Category: Martinez-Julvez M]]
[[Category: Perez-Dorado, I]]
[[Category: Perez-Dorado I]]
[[Category: Sancho, J]]
[[Category: Sancho J]]
[[Category: Drug discovery]]
[[Category: Electron transport]]
[[Category: Flavodoxin]]
[[Category: Flavoprotein]]
[[Category: Fmn]]
[[Category: Protein hinhibitor]]
[[Category: Transport]]