7wba: Difference between revisions

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'''Unreleased structure'''


The entry 7wba is ON HOLD  until Paper Publication
==Crystal structure of Bovine Pancreatic Trypsin in complex with Tryptamine at Room Temperature==
<StructureSection load='7wba' size='340' side='right'caption='[[7wba]], [[Resolution|resolution]] 1.45&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[7wba]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7WBA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7WBA FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.45&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=TSS:2-(1H-INDOL-3-YL)ETHANAMINE'>TSS</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7wba FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7wba OCA], [https://pdbe.org/7wba PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7wba RCSB], [https://www.ebi.ac.uk/pdbsum/7wba PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7wba ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/TRY1_BOVIN TRY1_BOVIN]
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
In situ diffraction data collection using crystallization plates has been utilized for macromolecules to evaluate crystal quality without requiring additional sample treatment such as cryocooling. Although it is difficult to collect complete data sets using this technique due to the mechanical limitation of crystal rotation, recent advances in methods for data collection from multiple crystals have overcome this issue. At SPring-8, an in situ diffraction measurement system was constructed consisting of a goniometer for a plate, an articulated robot and plate storage. Using this system, complete data sets were obtained utilizing the small-wedge measurement method. Combining this system with an acoustic liquid handler to prepare protein-ligand complex crystals by applying fragment compounds to trypsin crystals for in situ soaking, binding was confirmed for seven out of eight compounds. These results show that the system functioned properly to collect complete data for structural analysis and to expand the capability for ligand screening in combination with a liquid dispenser.


Authors: Sakai, N., Okumura, H., Yamamoto, M., Kumasaka, T.
In situ crystal data-collection and ligand-screening system at SPring-8.,Okumura H, Sakai N, Murakami H, Mizuno N, Nakamura Y, Ueno G, Masunaga T, Kawamura T, Baba S, Hasegawa K, Yamamoto M, Kumasaka T Acta Crystallogr F Struct Biol Commun. 2022 Jun 1;78(Pt 6):241-251. doi: , 10.1107/S2053230X22005283. Epub 2022 May 27. PMID:35647681<ref>PMID:35647681</ref>


Description: Crystal structure of Bovine Pancreatic Trypsin in complex with Tryptamine at Room Temperature
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
[[Category: Unreleased Structures]]
</div>
[[Category: Okumura, H]]
<div class="pdbe-citations 7wba" style="background-color:#fffaf0;"></div>
[[Category: Yamamoto, M]]
 
[[Category: Sakai, N]]
==See Also==
[[Category: Kumasaka, T]]
*[[Trypsin 3D structures|Trypsin 3D structures]]
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Bos taurus]]
[[Category: Large Structures]]
[[Category: Kumasaka T]]
[[Category: Okumura H]]
[[Category: Sakai N]]
[[Category: Yamamoto M]]

Latest revision as of 09:18, 17 October 2024

Crystal structure of Bovine Pancreatic Trypsin in complex with Tryptamine at Room Temperature

7wba, resolution 1.45Å

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