3emz: Difference between revisions

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<StructureSection load='3emz' size='340' side='right'caption='[[3emz]], [[Resolution|resolution]] 2.08&Aring;' scene=''>
<StructureSection load='3emz' size='340' side='right'caption='[[3emz]], [[Resolution|resolution]] 2.08&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3emz]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EMZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EMZ FirstGlance]. <br>
<table><tr><td colspan='2'>[[3emz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Paenibacillus_barcinonensis Paenibacillus barcinonensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EMZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EMZ FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HXH:(1S,2S,3R,6R)-6-[(4-PHENOXYBENZYL)AMINO]CYCLOHEX-4-ENE-1,2,3-TRIOL'>HXH</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.08&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3emc|3emc]], [[3emq|3emq]]</div></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HXH:(1S,2S,3R,6R)-6-[(4-PHENOXYBENZYL)AMINO]CYCLOHEX-4-ENE-1,2,3-TRIOL'>HXH</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Endo-1,4-beta-xylanase Endo-1,4-beta-xylanase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.8 3.2.1.8] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3emz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3emz OCA], [https://pdbe.org/3emz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3emz RCSB], [https://www.ebi.ac.uk/pdbsum/3emz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3emz ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3emz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3emz OCA], [https://pdbe.org/3emz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3emz RCSB], [https://www.ebi.ac.uk/pdbsum/3emz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3emz ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/XYNB_PAEBA XYNB_PAEBA]] Plays a role in plant xylan biodegradation, probably via the hydrolysis of short xylooligosaccharides resulting from extracellular xylan hydrolysis, once they have been transported inside cells. Shows similar activity on xylans of different rate of arabinose or methylglucuronic substitution. Also displays high activity on aryl-xylosides. Is active on xylotetraose and xylotriose, but does not hydrolyze xylobiose, indicating that XynB is a xylanase and not a beta-xylosidase.<ref>PMID:12698280</ref> <ref>PMID:8998999</ref>
[https://www.uniprot.org/uniprot/XYNB_PAEBA XYNB_PAEBA] Plays a role in plant xylan biodegradation, probably via the hydrolysis of short xylooligosaccharides resulting from extracellular xylan hydrolysis, once they have been transported inside cells. Shows similar activity on xylans of different rate of arabinose or methylglucuronic substitution. Also displays high activity on aryl-xylosides. Is active on xylotetraose and xylotriose, but does not hydrolyze xylobiose, indicating that XynB is a xylanase and not a beta-xylosidase.<ref>PMID:12698280</ref> <ref>PMID:8998999</ref>  
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Endo-1,4-beta-xylanase]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Isorna, P]]
[[Category: Paenibacillus barcinonensis]]
[[Category: Sanz-Aparicio, J]]
[[Category: Isorna P]]
[[Category: Gh10 enzyme complex]]
[[Category: Sanz-Aparicio J]]
[[Category: Hydrolase]]
Retrieved from "https://proteopedia.org/3emz"