3ex8: Difference between revisions

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<StructureSection load='3ex8' size='340' side='right'caption='[[3ex8]], [[Resolution|resolution]] 2.56&Aring;' scene=''>
<StructureSection load='3ex8' size='340' side='right'caption='[[3ex8]], [[Resolution|resolution]] 2.56&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3ex8]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/"vibrio_subtilis"_ehrenberg_1835 "vibrio subtilis" ehrenberg 1835]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EX8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EX8 FirstGlance]. <br>
<table><tr><td colspan='2'>[[3ex8]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EX8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EX8 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AIF:[(2R,3S,4R,5E)-5-[(5-AMINO-2,6-DIOXO-3H-PYRIMIDIN-4-YL)IMINO]-2,3,4-TRIHYDROXY-PENTYL]+DIHYDROGEN+PHOSPHATE'>AIF</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.56&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2b3z|2b3z]], [[2d5n|2d5n]]</div></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AIF:[(2R,3S,4R,5E)-5-[(5-AMINO-2,6-DIOXO-3H-PYRIMIDIN-4-YL)IMINO]-2,3,4-TRIHYDROXY-PENTYL]+DIHYDROGEN+PHOSPHATE'>AIF</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BSU23280, ribD, ribG ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 "Vibrio subtilis" Ehrenberg 1835])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ex8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ex8 OCA], [https://pdbe.org/3ex8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ex8 RCSB], [https://www.ebi.ac.uk/pdbsum/3ex8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ex8 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ex8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ex8 OCA], [https://pdbe.org/3ex8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ex8 RCSB], [https://www.ebi.ac.uk/pdbsum/3ex8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ex8 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/RIBD_BACSU RIBD_BACSU]] Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'-phosphate.  
[https://www.uniprot.org/uniprot/RIBD_BACSU RIBD_BACSU] Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'-phosphate.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Vibrio subtilis ehrenberg 1835]]
[[Category: Bacillus subtilis]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Chen, S C]]
[[Category: Chen SC]]
[[Category: Liaw, S H]]
[[Category: Liaw SH]]
[[Category: Lin, Y H]]
[[Category: Lin YH]]
[[Category: Yu, H C]]
[[Category: Yu HC]]
[[Category: Alpha/beta/alpha]]
[[Category: Deaminase domain]]
[[Category: Hydrolase]]
[[Category: Metal-binding]]
[[Category: Multifunctional enzyme]]
[[Category: Nadp]]
[[Category: Oxidoreductase]]
[[Category: Reductase domain]]
[[Category: Riboflavin biosynthesis]]
[[Category: Zinc]]
Retrieved from "https://proteopedia.org/3ex8"