3fwy: Difference between revisions

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<StructureSection load='3fwy' size='340' side='right'caption='[[3fwy]], [[Resolution|resolution]] 1.63&Aring;' scene=''>
<StructureSection load='3fwy' size='340' side='right'caption='[[3fwy]], [[Resolution|resolution]] 1.63&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3fwy]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhos4 Rhos4]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3end 3end]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FWY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FWY FirstGlance]. <br>
<table><tr><td colspan='2'>[[3fwy]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Cereibacter_sphaeroides_2.4.1 Cereibacter sphaeroides 2.4.1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FWY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FWY FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.63&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">bchL, RHOS4_18930, RSP_0288 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272943 RHOS4])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fwy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fwy OCA], [https://pdbe.org/3fwy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fwy RCSB], [https://www.ebi.ac.uk/pdbsum/3fwy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fwy ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fwy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fwy OCA], [https://pdbe.org/3fwy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fwy RCSB], [https://www.ebi.ac.uk/pdbsum/3fwy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fwy ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/BCHL_RHOS4 BCHL_RHOS4]] Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP.[HAMAP-Rule:MF_00355]<ref>PMID:19006326</ref>
[https://www.uniprot.org/uniprot/BCHL_CERS4 BCHL_CERS4] Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP.[HAMAP-Rule:MF_00355]<ref>PMID:19006326</ref>  
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fw/3fwy_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fw/3fwy_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Cereibacter sphaeroides 2 4.1]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Rhos4]]
[[Category: Barney BM]]
[[Category: Barney, B M]]
[[Category: Hamilton TL]]
[[Category: Hamilton, T L]]
[[Category: Jones A]]
[[Category: Jones, A]]
[[Category: Peters JW]]
[[Category: Peters, J W]]
[[Category: Sarma R]]
[[Category: Sarma, R]]
[[Category: Seefeldt LC]]
[[Category: Seefeldt, L C]]
[[Category: Atp-binding]]
[[Category: Bacteriochlorophyll biosynthesis]]
[[Category: Bchl]]
[[Category: Chlorophyll biosynthesis]]
[[Category: Dpor]]
[[Category: Electron donor]]
[[Category: Fe protein]]
[[Category: Iron]]
[[Category: Iron-sulfur]]
[[Category: Metal-binding]]
[[Category: Mgadp]]
[[Category: Mixed alpha-beta domain]]
[[Category: Nitrogenase]]
[[Category: Nucleotide-binding]]
[[Category: Oxidoreductase]]
[[Category: Photosynthesis]]
[[Category: Protochlorophyllide]]
Retrieved from "https://proteopedia.org/3fwy"