3fyn: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
 
Line 3: Line 3:
<StructureSection load='3fyn' size='340' side='right'caption='[[3fyn]], [[Resolution|resolution]] 1.45&Aring;' scene=''>
<StructureSection load='3fyn' size='340' side='right'caption='[[3fyn]], [[Resolution|resolution]] 1.45&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3fyn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Uncultivated_bacterium Uncultivated bacterium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FYN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FYN FirstGlance]. <br>
<table><tr><td colspan='2'>[[3fyn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Uncultured_bacterium Uncultured bacterium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FYN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FYN FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.449&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ORF1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=77133 uncultivated bacterium])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fyn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fyn OCA], [https://pdbe.org/3fyn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fyn RCSB], [https://www.ebi.ac.uk/pdbsum/3fyn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fyn ProSAT], [https://www.topsan.org/Proteins/MCSG/3fyn TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fyn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fyn OCA], [https://pdbe.org/3fyn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fyn RCSB], [https://www.ebi.ac.uk/pdbsum/3fyn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fyn ProSAT], [https://www.topsan.org/Proteins/MCSG/3fyn TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/B0BFQ1_9BACT B0BFQ1_9BACT]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 14: Line 15:
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fy/3fyn_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fy/3fyn_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
Line 22: Line 23:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Uncultivated bacterium]]
[[Category: Uncultured bacterium]]
[[Category: Curmi, P M.G]]
[[Category: Curmi PMG]]
[[Category: Deshpande, C N]]
[[Category: Deshpande CN]]
[[Category: Doolittle, W F]]
[[Category: Doolittle WF]]
[[Category: Edwards, A M]]
[[Category: Edwards AM]]
[[Category: Evdokimova, E]]
[[Category: Evdokimova E]]
[[Category: Harrop, S J]]
[[Category: Harrop SJ]]
[[Category: Joachimiak, A]]
[[Category: Joachimiak A]]
[[Category: Koenig, J E]]
[[Category: Koenig JE]]
[[Category: Kudritska, M]]
[[Category: Kudritska M]]
[[Category: Structural genomic]]
[[Category: Mabbutt BC]]
[[Category: Mabbutt, B C]]
[[Category: Osipiuk J]]
[[Category: Osipiuk, J]]
[[Category: Savchenko A]]
[[Category: Savchenko, A]]
[[Category: Stokes HW]]
[[Category: Stokes, H W]]
[[Category: Sureshan V]]
[[Category: Sureshan, V]]
[[Category: Integron cassette protein]]
[[Category: Mcsg]]
[[Category: Mobile metagenome]]
[[Category: PSI, Protein structure initiative]]
[[Category: Unknown function]]
Retrieved from "https://proteopedia.org/3fyn"