2ww8: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(One intermediate revision by the same user not shown)
Line 3: Line 3:
<StructureSection load='2ww8' size='340' side='right'caption='[[2ww8]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
<StructureSection load='2ww8' size='340' side='right'caption='[[2ww8]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2ww8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"diplococcus_pneumoniae"_(klein_1884)_weichselbaum_1886 "diplococcus pneumoniae" (klein 1884) weichselbaum 1886]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WW8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WW8 FirstGlance]. <br>
<table><tr><td colspan='2'>[[2ww8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae Streptococcus pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WW8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WW8 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ww8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ww8 OCA], [https://pdbe.org/2ww8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ww8 RCSB], [https://www.ebi.ac.uk/pdbsum/2ww8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ww8 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ww8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ww8 OCA], [https://pdbe.org/2ww8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ww8 RCSB], [https://www.ebi.ac.uk/pdbsum/2ww8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ww8 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/A0A0H2UNT6_STRPN A0A0H2UNT6_STRPN]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 12: Line 15:
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ww/2ww8_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ww/2ww8_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
Line 31: Line 34:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Contreras-Martel, C]]
[[Category: Streptococcus pneumoniae]]
[[Category: Dessen, A]]
[[Category: Contreras-Martel C]]
[[Category: Di-Guilmi, A M]]
[[Category: Dessen A]]
[[Category: El-Mortaji, L]]
[[Category: Di-Guilmi AM]]
[[Category: Izore, T]]
[[Category: El-Mortaji L]]
[[Category: Manzano, C]]
[[Category: Izore T]]
[[Category: Terrasse, R]]
[[Category: Manzano C]]
[[Category: Vernet, T]]
[[Category: Terrasse R]]
[[Category: Adhesin]]
[[Category: Vernet T]]
[[Category: Cell adhesion]]
[[Category: Cna_b]]
[[Category: Igg]]
[[Category: Integrin]]
[[Category: Pilus]]

Latest revision as of 05:35, 17 October 2024

Structure of the pilus adhesin (RrgA) from Streptococcus pneumoniae

2ww8, resolution 1.90Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA