6dls: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
Line 3: Line 3:
<StructureSection load='6dls' size='340' side='right'caption='[[6dls]], [[Resolution|resolution]] 2.88&Aring;' scene=''>
<StructureSection load='6dls' size='340' side='right'caption='[[6dls]], [[Resolution|resolution]] 2.88&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[6dls]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6DLS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6DLS FirstGlance]. <br>
<table><tr><td colspan='2'>[[6dls]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Syntrophothermus_lipocalidus_DSM_12680 Syntrophothermus lipocalidus DSM 12680]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6DLS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6DLS FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PRP:ALPHA-PHOSPHORIBOSYLPYROPHOSPHORIC+ACID'>PRP</scene>, <scene name='pdbligand=TL:THALLIUM+(I)+ION'>TL</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.885&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CCC:CYTIDINE-5-PHOSPHATE-2,3-CYCLIC+PHOSPHATE'>CCC</scene>, <scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CCC:CYTIDINE-5-PHOSPHATE-2,3-CYCLIC+PHOSPHATE'>CCC</scene>, <scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PRP:ALPHA-PHOSPHORIBOSYLPYROPHOSPHORIC+ACID'>PRP</scene>, <scene name='pdbligand=TL:THALLIUM+(I)+ION'>TL</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6dls FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6dls OCA], [https://pdbe.org/6dls PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6dls RCSB], [https://www.ebi.ac.uk/pdbsum/6dls PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6dls ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6dls FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6dls OCA], [https://pdbe.org/6dls PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6dls RCSB], [https://www.ebi.ac.uk/pdbsum/6dls PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6dls ProSAT]</span></td></tr>
</table>
</table>
Line 25: Line 25:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Peselis, A]]
[[Category: Syntrophothermus lipocalidus DSM 12680]]
[[Category: Serganov, A]]
[[Category: Peselis A]]
[[Category: Non-coding]]
[[Category: Serganov A]]
[[Category: Riboswitch]]
[[Category: Rna]]
[[Category: Ykkc]]

Latest revision as of 10:07, 22 May 2024

PRPP Riboswitch bound to PRPP, thallium acetate soaked structure

6dls, resolution 2.88Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA