6yjf: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(One intermediate revision by the same user not shown)
Line 3: Line 3:
<StructureSection load='6yjf' size='340' side='right'caption='[[6yjf]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
<StructureSection load='6yjf' size='340' side='right'caption='[[6yjf]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[6yjf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Haemamoeba_vivax Haemamoeba vivax]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6YJF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6YJF FirstGlance]. <br>
<table><tr><td colspan='2'>[[6yjf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_vivax Plasmodium vivax]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6YJF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6YJF FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=OTQ:(2~{S})-2-(5-nitrofuran-2-yl)-2,3,5,6,7,8-hexahydro-1~{H}-[1]benzothiolo[2,3-d]pyrimidin-4-one'>OTQ</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PVC01_070025900, PVP01_0721000, PVT01_070026100 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5855 Haemamoeba vivax])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=OTQ:(2~{S})-2-(5-nitrofuran-2-yl)-2,3,5,6,7,8-hexahydro-1~{H}-[1]benzothiolo[2,3-d]pyrimidin-4-one'>OTQ</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Phosphoglycerate_kinase Phosphoglycerate kinase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.2.3 2.7.2.3] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6yjf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6yjf OCA], [https://pdbe.org/6yjf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6yjf RCSB], [https://www.ebi.ac.uk/pdbsum/6yjf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6yjf ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6yjf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6yjf OCA], [https://pdbe.org/6yjf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6yjf RCSB], [https://www.ebi.ac.uk/pdbsum/6yjf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6yjf ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/A5K6T9_PLAVS A5K6T9_PLAVS]


==See Also==
==See Also==
Line 14: Line 15:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Haemamoeba vivax]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Phosphoglycerate kinase]]
[[Category: Plasmodium vivax]]
[[Category: Blaszczyk, B K]]
[[Category: Blaszczyk BK]]
[[Category: Brear, P]]
[[Category: Brear P]]
[[Category: Hyvonen, M]]
[[Category: Hyvonen M]]
[[Category: Biosynthetic protein]]
[[Category: Kinase]]
[[Category: Metabolic enzyme]]

Latest revision as of 13:28, 24 January 2024

Plasmoodium vivax phosphoglycerate kinase bound to nitrofuran inhibitor from PEGSmear at pH 6.5

6yjf, resolution 1.85Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA