3pa2: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
Line 3: Line 3:
<StructureSection load='3pa2' size='340' side='right'caption='[[3pa2]], [[Resolution|resolution]] 1.48&Aring;' scene=''>
<StructureSection load='3pa2' size='340' side='right'caption='[[3pa2]], [[Resolution|resolution]] 1.48&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3pa2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Norwalk_calicivirus Norwalk calicivirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PA2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3PA2 FirstGlance]. <br>
<table><tr><td colspan='2'>[[3pa2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Norwalk_virus Norwalk virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PA2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3PA2 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.48&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3onu|3onu]], [[3ony|3ony]], [[3pa1|3pa1]], [[3r6j|3r6j]], [[3r6k|3r6k]], [[3q38|3q38]], [[3q39|3q39]], [[3q3a|3q3a]], [[3q6q|3q6q]], [[3q6r|3q6r]]</div></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PRD_900054:Lewis+Y+antigen,+beta+anomer'>PRD_900054</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Capsid protein ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=11983 Norwalk calicivirus])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3pa2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pa2 OCA], [https://pdbe.org/3pa2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3pa2 RCSB], [https://www.ebi.ac.uk/pdbsum/3pa2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3pa2 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3pa2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pa2 OCA], [https://pdbe.org/3pa2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3pa2 RCSB], [https://www.ebi.ac.uk/pdbsum/3pa2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3pa2 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q5F4T5_9CALI Q5F4T5_9CALI]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 26: Line 27:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Norwalk calicivirus]]
[[Category: Norwalk virus]]
[[Category: Biertumpfel, C]]
[[Category: Biertumpfel C]]
[[Category: Chen, L]]
[[Category: Chen L]]
[[Category: Georgiev, I]]
[[Category: Georgiev I]]
[[Category: Hansman, G S]]
[[Category: Hansman GS]]
[[Category: Katayama, K]]
[[Category: Katayama K]]
[[Category: Kwong, P D]]
[[Category: Kwong PD]]
[[Category: McLellan, J S]]
[[Category: McLellan JS]]
[[Category: Capsid]]
[[Category: Norovirus]]
[[Category: P-domain]]
[[Category: Receptor]]
[[Category: Viral protein]]