3q20: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
Line 3: Line 3:
<StructureSection load='3q20' size='340' side='right'caption='[[3q20]], [[Resolution|resolution]] 1.71&Aring;' scene=''>
<StructureSection load='3q20' size='340' side='right'caption='[[3q20]], [[Resolution|resolution]] 1.71&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3q20]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Theeb Theeb]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3ka1 3ka1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3Q20 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3Q20 FirstGlance]. <br>
<table><tr><td colspan='2'>[[3q20]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermosynechococcus_vestitus_BP-1 Thermosynechococcus vestitus BP-1]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3ka1 3ka1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3Q20 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3Q20 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=HEZ:HEXANE-1,6-DIOL'>HEZ</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.71&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">rbcX, tll1505 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=197221 THEEB])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=HEZ:HEXANE-1,6-DIOL'>HEZ</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3q20 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3q20 OCA], [https://pdbe.org/3q20 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3q20 RCSB], [https://www.ebi.ac.uk/pdbsum/3q20 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3q20 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3q20 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3q20 OCA], [https://pdbe.org/3q20 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3q20 RCSB], [https://www.ebi.ac.uk/pdbsum/3q20 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3q20 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/RBCX_THEVB RBCX_THEVB] An RbcL-specific chaperone. Required for assembly of the RbcL8 core (PubMed:19081849) (Probable). The central cleft of the RbcX homodimer (RbcX2) binds the C-terminus of a RbcL monomer, stabilizing the C-terminus and probably preventing its reassociation with chaperonin GroEL-ES. At the same time the peripheral region of RbcX2 binds a second RbcL monomer, bridging the RbcL homodimers in the correct orientation. The RbcX2(2)-bound RbcL dimers then assemble into the RbcL8 core (RbcL8-(RbcX2)8). RbcS binding triggers the release of RbcX2 (By similarity).[UniProtKB:Q44212]<ref>PMID:19081849</ref> <ref>PMID:21821880</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 24:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Theeb]]
[[Category: Thermosynechococcus vestitus BP-1]]
[[Category: Jaskolski, M]]
[[Category: Jaskolski M]]
[[Category: Krzywda, S]]
[[Category: Krzywda S]]
[[Category: Szczepaniak, A]]
[[Category: Szczepaniak A]]
[[Category: Tarnawski, M]]
[[Category: Tarnawski M]]
[[Category: Chaperone]]
[[Category: Helix bundle]]
[[Category: Rubisco assembly]]

Latest revision as of 17:09, 1 November 2023

Crystal structure of RbcX C103A mutant from Thermosynechococcus elongatus

3q20, resolution 1.71Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA