7p80: Difference between revisions
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==Crystal structure of ClpP from Bacillus subtilis in complex with ADEP2 (compressed state)== | ==Crystal structure of ClpP from Bacillus subtilis in complex with ADEP2 (compressed state)== | ||
<StructureSection load='7p80' size='340' side='right'caption='[[7p80]]' scene=''> | <StructureSection load='7p80' size='340' side='right'caption='[[7p80]], [[Resolution|resolution]] 2.98Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7P80 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7P80 FirstGlance]. <br> | <table><tr><td colspan='2'>[[7p80]] is a 9 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis_subsp._subtilis_str._168 Bacillus subtilis subsp. subtilis str. 168] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7P80 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7P80 FirstGlance]. <br> | ||
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7p80 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7p80 OCA], [https://pdbe.org/7p80 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7p80 RCSB], [https://www.ebi.ac.uk/pdbsum/7p80 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7p80 ProSAT]</span></td></tr> | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.98Å</td></tr> | ||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CXP:CYCLOHEXANE+PROPIONIC+ACID'>CXP</scene>, <scene name='pdbligand=MP8:(4R)-4-METHYL-L-PROLINE'>MP8</scene>, <scene name='pdbligand=WFP:3,5-DIFLUORO-L-PHENYLALANINE'>WFP</scene>, <scene name='pdbligand=YCP:(2S)-PIPERIDINE-2-CARBOXYLIC+ACID'>YCP</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7p80 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7p80 OCA], [https://pdbe.org/7p80 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7p80 RCSB], [https://www.ebi.ac.uk/pdbsum/7p80 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7p80 ProSAT]</span></td></tr> | |||
</table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/CLPP_BACSU CLPP_BACSU] Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity). ClpXP is involved in the complete degradation of the Site-2 clipped anti-sigma-W factor RsiW. This results in the release of SigW and the transcription activation of the genes under the control of the sigma-W factor.<ref>PMID:16899079</ref> | |||
==See Also== | |||
*[[Clp protease 3D structures|Clp protease 3D structures]] | |||
== References == | |||
<references/> | |||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Bacillus subtilis subsp. subtilis str. 168]] | |||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: | [[Category: Synthetic construct]] | ||
[[Category: Kim L]] | |||
[[Category: Kim MK]] | |||
[[Category: Kwon DH]] | |||
[[Category: Lee B-G]] | |||
[[Category: Song HK]] | |||
