8ark: Difference between revisions

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~~'''Unreleased structure'''~~

~~The entry~~ 8ark is ~~ON HOLD~~

==Crystal structure of DEAD-box protein Dbp2 in apo form==

== Structural highlights ==

<table><tr><td colspan='2'>[[8ark]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8ARK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8ARK FirstGlance]. <br>

</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.22Å</td></tr>

<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8ark FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8ark OCA], [https://pdbe.org/8ark PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8ark RCSB], [https://www.ebi.ac.uk/pdbsum/8ark PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8ark ProSAT]</span></td></tr>

</table>

== Function ==

[https://www.uniprot.org/uniprot/DBP2_YEAST DBP2_YEAST] ATP-dependent RNA helicase involved nonsense-mediated mRNA decay and ribosome biogenesis through rRNA processing (PubMed:11585918, PubMed:7883168). Associates directly with chromatin, correlating with transcriptional activity (PubMed:22679025). Required for assembly of mRNA-binding proteins YRA1, NAB2, and MEX67 onto poly(A)+ RNA (PubMed:23721653).<ref>PMID:11585918</ref> <ref>PMID:22679025</ref> <ref>PMID:23721653</ref> <ref>PMID:7883168</ref>

~~Authors~~:

==See Also==

*[[Helicase 3D structures|Helicase 3D structures]]

~~Description~~:

== References ==

[[Category: ~~Unreleased Structures~~]]

__TOC__

</StructureSection>

[[Category: Large Structures]]

[[Category: Saccharomyces cerevisiae]]

[[Category: Rety S]]

[[Category: Xi XG]]

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@@ Line 1: / Line 1: @@
-'''Unreleased structure'''
-The entry 8ark is ON HOLD
+==Crystal structure of DEAD-box protein Dbp2 in apo form==
+<StructureSection load='8ark' size='340' side='right'caption='[[8ark]], [[Resolution|resolution]] 3.22&Aring;' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[8ark]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8ARK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8ARK FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.22&#8491;</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8ark FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8ark OCA], [https://pdbe.org/8ark PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8ark RCSB], [https://www.ebi.ac.uk/pdbsum/8ark PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8ark ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/DBP2_YEAST DBP2_YEAST] ATP-dependent RNA helicase involved nonsense-mediated mRNA decay and ribosome biogenesis through rRNA processing (PubMed:11585918, PubMed:7883168). Associates directly with chromatin, correlating with transcriptional activity (PubMed:22679025). Required for assembly of mRNA-binding proteins YRA1, NAB2, and MEX67 onto poly(A)+ RNA (PubMed:23721653).<ref>PMID:11585918</ref> <ref>PMID:22679025</ref> <ref>PMID:23721653</ref> <ref>PMID:7883168</ref>
-Authors:
+==See Also==
+*[[Helicase 3D structures|Helicase 3D structures]]
-Description:
+== References ==
-[[Category: Unreleased Structures]]
+<references/>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
+[[Category: Saccharomyces cerevisiae]]
+[[Category: Rety S]]
+[[Category: Xi XG]]