7e5q: Difference between revisions
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==Crystal Structure of Dye Decolorizing peroxidase from Bacillus subtilis at acidic pH== | ==Crystal Structure of Dye Decolorizing peroxidase from Bacillus subtilis at acidic pH== | ||
<StructureSection load='7e5q' size='340' side='right'caption='[[7e5q]]' scene=''> | <StructureSection load='7e5q' size='340' side='right'caption='[[7e5q]], [[Resolution|resolution]] 1.90Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7E5Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7E5Q FirstGlance]. <br> | <table><tr><td colspan='2'>[[7e5q]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7E5Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7E5Q FirstGlance]. <br> | ||
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7e5q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7e5q OCA], [https://pdbe.org/7e5q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7e5q RCSB], [https://www.ebi.ac.uk/pdbsum/7e5q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7e5q ProSAT]</span></td></tr> | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9Å</td></tr> | ||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=OXY:OXYGEN+MOLECULE'>OXY</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7e5q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7e5q OCA], [https://pdbe.org/7e5q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7e5q RCSB], [https://www.ebi.ac.uk/pdbsum/7e5q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7e5q ProSAT]</span></td></tr> | |||
</table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/EFEB_BACSU EFEB_BACSU] Involved in the recovery of exogenous heme iron (By similarity). Extracts iron from heme while preserving the protoporphyrin ring intact (By similarity). Part of the iron transporter system efeUOB/M involved in iron import (PubMed:16672620, PubMed:23764491). Catalyzes the peroxide-mediated oxidation of Fe(2+) into Fe(3+); EfeM binds Fe(3+) and delivers it to the cell membrane permease EfeU (PubMed:23764491).[UniProtKB:P31545]<ref>PMID:16672620</ref> <ref>PMID:23764491</ref> | |||
== References == | |||
<references/> | |||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Bacillus subtilis]] | |||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Dalal V]] | [[Category: Dalal V]] | ||
[[Category: Dhankhar P]] | [[Category: Dhankhar P]] | ||
[[Category: Kumar P]] | [[Category: Kumar P]] | ||
Latest revision as of 14:11, 13 August 2026
Crystal Structure of Dye Decolorizing peroxidase from Bacillus subtilis at acidic pH
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