Sandbox Reserved 1766: Difference between revisions
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=SHOC2-PP1C-MRAS= | =SHOC2-PP1C-MRAS= | ||
<StructureSection load='1stp' size='340' side='right' caption='SHOC2-MRAS-PP1C Holophosphatase Complex' scene='95/952694/Overall_image/2'> | <StructureSection load='1stp' size='340' side='right' caption='SHOC2-MRAS-PP1C Holophosphatase Complex' scene='95/952694/Overall_image/2'> | ||
<scene name='95/952694/Mras_switch_i/7'>TextToBeDisplayed</scene> | |||
<scene name='95/952694/Mras_switch_i/ | |||
== Introduction == | == Introduction == | ||
<scene name='95/952694/Overall_image/2'>SHOC2-MRAS-PP1C</scene> (SMP) is a 3-subunit complex essential for cell proliferation and the survival of many cancers<ref name="Hauseman">PMID:35830882</ref> and RASopathies.<ref name="Kwon">PMID: 35831509</ref> | <scene name='95/952694/Overall_image/2'>The SHOC2-MRAS-PP1C</scene> (SMP) is a 3-subunit complex essential for cell proliferation and the survival of many cancers<ref name="Hauseman">PMID:35830882</ref> and RASopathies.<ref name="Kwon">PMID: 35831509</ref> The SMP holophosphatase complex functions as a key regulator of the receptor tyrosine kinase (RTK) signaling pathway by removing an inhibitory phosphate on the RAF family of proteins to allow for MAPK signaling.<ref name="Kwon">PMID: 35831509</ref> This interaction of the RTK-Ras pathway and the SMP complex drives cell proliferation.<ref name="Hauseman">PMID:35830882</ref> The SMP complex is made of three subunits, SHOC2, PP1C, and MRAS. Each of these subunits has a different shape that corresponds to its different function. <scene name='95/952694/Shoc2intro/1'>The SHOC2 subunit</scene> uses a crescent shape to enhance substrate interactions and complex stability.<ref name="Liau">PMID: 35768504</ref> <scene name='95/952694/Pp1cintro/3'>The PP1C subunit</scene> is a phosphatase, and it contains the catalytic site of the complex which dephosphorylates the N-terminal phosphoserine (NTpS) of RAF green link here.<ref name="Liau">PMID: 35768504</ref> <scene name='95/952694/Pp1ccorrectintro/1'>The MRAS subunit</scene> binds to GTP which triggers assembly of the SMP complex. The C-terminus of the MRAS subunit localizes the complex to the cell membrane.<ref name="Liau">PMID: 35768504</ref> Mutations in one or multiple of these subunits leads to over-activation of the signaling pathway, which may result in cancer and developmental disorders called RASopathies.<ref name="Kwon">PMID: 35831509</ref> | ||
There are many regulatory mechanisms that serve as a lock on this RAS-MAPK pathway, decreasing the likelihood of unintentional pathway activation. One is a protein dimer called 14-3-3 that keeps inactive RAF localized to the cytoplasm. An N-terminal phosphorylated serine keeps RAF bound to this protein dimer, and when the SMP complex is assembled, the catalytic subunit, PP1C, removes the phosphate group from the serine, releasing RAF from the 14-3-3 dimer, and activating the RAS-MAPK cell proliferation pathway. | |||
In all images and animations, {{Font color|cyan|SHOC2}} will be shown as cyan blue, {{Font color|lime|MRAS}} as lime, and {{Font color|violet|PP1C}} as violet. Other important components involved in the function of the SMP complex include the {{Font color|salmon|14-3-3}} dimer and {{Font color|slate-blue|Raf}}, which will be shown in salmon and slate-blue, respectively. | |||
== Significance == | == Significance == | ||
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=== SHOC2 === | === SHOC2 === | ||
SHOC2 is essential for complex formation, however SHOC2 only undergoes a 6° <scene name='95/952693/Shoc2_gtp_bound_vs_gdp_bound/7'>conformational change</scene> when MRAS and PP1C bind.<ref name="Hauseman">PMID:35830882</ref> SHOC2 is just the place where MRAS and PP1C come together. SHOC2 and PP1C first engage in binding with each other, and MRAS-GTP binds, stabilizing SHOC2 and PP1C binding, and fully forming the SHOC2-MRAS-PP1C holophophatase complex. <ref name="Kwon">PMID: 35831509</ref> | SHOC2 is essential for complex formation, however SHOC2 only undergoes a 6° <scene name='95/952693/Shoc2_gtp_bound_vs_gdp_bound/7'>conformational change</scene> when MRAS and PP1C bind.<ref name="Hauseman">PMID:35830882</ref> SHOC2 is just the place where MRAS and PP1C come together. SHOC2 and PP1C first engage in binding with each other, and MRAS-GTP binds, stabilizing SHOC2 and PP1C binding, and fully forming the SHOC2-MRAS-PP1C holophophatase complex. <ref name="Kwon">PMID: 35831509</ref> | ||
=== PP1C === | === PP1C === | ||
SHOC2 has a RVxF binding motif that interacts with the PP1C RVxF binding site. The N-terminal loop of SHOC2 interacts with the RVxF binding site of PP1C, highlighting the structure and function connection of the complex. RVxF allows PP1C substrates to bind, whereas RAF has the RVxF motif, so it can bind to the hydrophobic region of SHOC2, allowing for greater specificity. Additionally, PP1C and SHOC2 do not change conformationally upon the binding of GTP, but rather they are inactive when RAS is bound to GDP due to steric strain. <scene name='95/952694/Pp1coverlay/ | The protein phosphatase 1 catalytic (PP1C) subunit contains the catalytic site of the complex which dephosphorylates the N-terminal phosphoserine (NTpS) of RAF.<ref name="Liau">PMID: 35768504</ref> When PP1C is bound to the surface formed between SHOC2 and MRAS, the active site is exposed and fully accessible for the substrate to bind in the holoenzyme complex.<ref name="Hauseman">PMID:35830882</ref> PP1C cannot act independently from the SMP complex because it lacks intrinsic substrate selectivity.<ref name="Liau">PMID: 35768504</ref> Therefore, PP1C requires the presence of SHOC2 and MRAS to function properly, whereas SHOC2 and MRAS may interact in a binary complex without the presence of PP1C.<ref name="Hauseman">PMID:35830882</ref> SMP complex formation is initially mediated by SHOC2 and PP1C, then stabilized by the GTP interactions in MRAS and SHOC2.<ref name="Kwon">PMID: 35831509</ref> | ||
PP1C activity is regulated by short linear interaction motifs or PP1C-binding regulatory proteins.<ref name="Hauseman">PMID:35830882</ref> The regulatory proteins bind to small motifs in PP1C, like RVXF.<ref name="Liau">PMID: 35768504</ref> The RVXF motif is located in PP1C through the N-terminal disordered region.<ref name="Kwon">PMID: 35831509</ref> | |||
There is a direct interaction between the RVXF motif of SHOC2 and the RVXF-binding pocket of PP1C.<ref name="Hauseman">PMID:35830882</ref> | |||
SHOC2 has a RVxF binding motif that interacts with the PP1C RVxF binding site. The N-terminal loop of SHOC2 interacts with the RVxF binding site of PP1C, highlighting the structure and function connection of the complex. RVxF allows PP1C substrates to bind, whereas RAF has the RVxF motif, so it can bind to the hydrophobic region of SHOC2, allowing for greater specificity. Additionally, PP1C and SHOC2 do not change conformationally upon the binding of GTP, but rather they are inactive when RAS is bound to GDP due to steric strain. <scene name='95/952694/Pp1coverlay/4'>PP1C retains the same structure</scene>with or without binding to the SMP complex as PP1C retains its enzymatic function independently.<ref name="Liau">PMID: 35768504</ref>. | |||
=== MRAS === | === MRAS === | ||
MRAS | |||
Ras proteins are GTP dependent switches that are associated with the plasma membrane.<ref name="Liau">PMID: 35768504</ref> [https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5555610/ Ras proteins] often regulate cycles during signal transduction. MRAS, one of the subunits in the SMP complex, is a RAS protein specific to SHOC2 and the SMP complex. Other RAS proteins may bind to SHOC2, but MRAS induces the complex formation with a significantly lower Kd (dissociation constant), thus has the strongest connection.<ref name="Liau">PMID: 35768504</ref> The interface between SHOC2 and MRAS consists of two switches, Switch I and Switch II.<ref name="Liau">PMID: 35768504</ref> The switch regions were the only regions in MRAS to conformationally change, depending on the state of GTP.<ref name="Liau">PMID: 35768504</ref> | |||
The formation of the SMP complex is stabilized and driven by the MRAS GTP-bound active state.<ref name="Hauseman">PMID:35830882</ref><ref name="Kwon">PMID: 35831509</ref> The tertiary structure formation is GTP dependent on multiple RAS forms.<ref name="Hauseman">PMID:35830882</ref> When GTP is bound to MRAS, the SMP complex forms and MRAS is in the active form. When GDP is bound to MRAS, the SMP complex does not form and MRAS is in the inactive form.<ref name="Liau">PMID: 35768504</ref> In order for MRAS to bind to SHOC2, MRAS must be in the active GTP bound state. When the inactive GDP is bound to MRAS, steric clashes between Switch 1 on MRAS and PP1C prevent SHOC2 binding and the SMP complex formation.<ref name="Liau">PMID: 35768504</ref> | |||
Additionally, the surface of MRAS that is buried in the complex overlaps the surfaces used to engage RAF, requiring two separate MRAS proteins to activate a single RAF molecule, one in the SMP complex and one to dephosphorylated Raf to activate the MAPK signaling cascade. The SMP complex is localized to the cell membrane or other RAS isoforms by the palmitoylated, C-terminus end of MRAS.<ref name="Hauseman">PMID:35830882</ref> In its <scene name='95/952694/Cell_membrane/3'>cell membrane bound Ras model</scene>, Ras has an extended, palmitoylated C-terminal helix which allows it to bind to the cell membrane.<ref name="Liau">PMID: 35768504</ref> | |||