Entertaining PDB codes: Difference between revisions
From Proteopedia
Jump to navigationJump to search
Eric Martz (talk | contribs) No edit summary |
Eric Martz (talk | contribs) No edit summary |
||
| (7 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
Here are some entertaining (amusing, humorous) PDB codes<ref>Thanks to Dan Bolser and the (now defunct) PDB Wiki for some of these examples.</ref>. | Here are some entertaining (amusing, humorous, funny) PDB codes<ref>Thanks to Dan Bolser and the (now defunct) PDB Wiki for some of these examples.</ref>. | ||
*[[1and]] | *[[1and]] | ||
*[[1aok]] appears to be A OK. | *[[1aok]] appears to be A OK. | ||
*[[1ask]] | *[[1ask]] | ||
*[[1atp]] includes ATP (but [[2atp]] does not). | |||
*[[1bad]] yes, its a theoretical model. | *[[1bad]] yes, its a theoretical model. | ||
*[[1bah]] | *[[1bah]] | ||
*[[1big]] has only 37 amino acids. | *[[1big]] has only 37 amino acids. | ||
*[[1bra]] has a binding pocket. | *[[1bra]] has a binding pocket. | ||
*[[1bob]]'s 54 C-terminal residues were bobbed off. | |||
*[[1boo]] | *[[1boo]] | ||
*[[1bye]] | *[[1bye]] | ||
| Line 14: | Line 16: | ||
*[[1dog]] | *[[1dog]] | ||
*[[1dud]] has an interesting trimeric biological unit. | *[[1dud]] has an interesting trimeric biological unit. | ||
*[[1dul]] is very interesting. | |||
*[[1dum]] | *[[1dum]] | ||
*[[1eat]] concerns an orally active compound. | *[[1eat]] concerns an orally active compound. | ||
| Line 24: | Line 27: | ||
*[[1hot]] | *[[1hot]] | ||
*[[1ion]] contains Mg++ | *[[1ion]] contains Mg++ | ||
*[[1jim]] has been jimmied with sequence insertion codes. | |||
*[[1joe]] | |||
*[[1lie]] | *[[1lie]] | ||
*[[1loo]] | *[[1loo]] | ||
*[[1nmr]] was solved by solution NMR | *[[1nmr]] was solved by solution NMR. Compare with 2nmr and 1xrd. | ||
*[[1oca]] | *[[1oca]] | ||
*[[1off]] | *[[1off]] | ||
| Line 40: | Line 45: | ||
*[[1wiz]] | *[[1wiz]] | ||
*[[1wow]] | *[[1wow]] | ||
*[[1xrd]] was solved by solution NMR. Compare with 1nmr, 2xrd. | |||
*[[1xyz]] | *[[1xyz]] | ||
*[[1zap]] is a protease. | *[[1zap]] is a protease. | ||
*[[1zyx]] | *[[1zyx]] | ||
*[[1zzz]] | *[[1zzz]] | ||
*[[2adp]] has no ADP, but [[1atp]] has ATP. | |||
*[[2bed]] was eventually put to bed. | *[[2bed]] was eventually put to bed. | ||
*[[2cuz]] has related entries (REMARK 900). | *[[2cuz]] has related entries (REMARK 900). | ||
| Line 51: | Line 58: | ||
*[[2pee]] | *[[2pee]] | ||
*[[2poo]] | *[[2poo]] | ||
*[[3ric]] Surely a personal favorite! | *[[2xrd]], [[4xrd]], [[5xrd]] were all solved by X-ray diffraction. Compare with 1xrd, 1nmr. | ||
*[[3ric]] Surely a personal favorite for [[User:Eric Martz]]! | |||
*[[4arf]] Pet friendly. | *[[4arf]] Pet friendly. | ||
*[[4fit]] Don't forfeit your histidine triad (HIT)! | *[[4fit]] Don't forfeit your histidine triad (HIT)! | ||
