2v30: Difference between revisions

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New page: left|200px<br /> <applet load="2v30" size="450" color="white" frame="true" align="right" spinBox="true" caption="2v30, resolution 2.00Å" /> '''HUMAN OROTIDINE 5'-...
 
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[[Image:2v30.gif|left|200px]]<br />
==Human orotidine 5'-phosphate decarboxylase domain of uridine monophospate synthetase (UMPS) in complex with its product UMP.==
<applet load="2v30" size="450" color="white" frame="true" align="right" spinBox="true"  
<StructureSection load='2v30' size='340' side='right' caption='[[2v30]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
caption="2v30, resolution 2.00&Aring;" />
== Structural highlights ==
'''HUMAN OROTIDINE 5'-PHOSPHATE DECARBOXYLASE DOMAIN OF URIDINE MONOPHOSPATE SYNTHETASE (UMPS) IN COMPLEX WITH ITS PRODUCT UMP.'''<br />
<table><tr><td colspan='2'>[[2v30]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V30 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2V30 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=U5P:URIDINE-5-MONOPHOSPHATE'>U5P</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2jgy|2jgy]]</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Orotidine-5'-phosphate_decarboxylase Orotidine-5'-phosphate decarboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.23 4.1.1.23] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2v30 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v30 OCA], [http://pdbe.org/2v30 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2v30 RCSB], [http://www.ebi.ac.uk/pdbsum/2v30 PDBsum]</span></td></tr>
</table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/v3/2v30_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2v30 ConSurf].
<div style="clear:both"></div>


==About this Structure==
==See Also==
2V30 is a [[http://en.wikipedia.org/wiki/Single_protein Single protein]] structure of sequence from [[http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]] with U5P as [[http://en.wikipedia.org/wiki/ligand ligand]]. Active as [[http://en.wikipedia.org/wiki/ ]], with EC number [[http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.23 4.1.1.23]]. Full crystallographic information is available from [[http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2V30 OCA]].
*[[Uridine 5'-monophosphate synthase|Uridine 5'-monophosphate synthase]]
[[Category: Homo sapiens]]
__TOC__
[[Category: Single protein]]
</StructureSection>
[[Category: Arrowsmith, C.]]
[[Category: Human]]
[[Category: Berglund, H.]]
[[Category: Orotidine-5'-phosphate decarboxylase]]
[[Category: Busam, R.]]
[[Category: Arrowsmith, C]]
[[Category: Collins, R.]]
[[Category: Berglund, H]]
[[Category: Dahlgren, L.G.]]
[[Category: Busam, R]]
[[Category: Edwards, A.]]
[[Category: Collins, R]]
[[Category: Flodin, S.]]
[[Category: Dahlgren, L G]]
[[Category: Flores, A.]]
[[Category: Edwards, A]]
[[Category: Graslund, S.]]
[[Category: Flodin, S]]
[[Category: Hallberg, B.M.]]
[[Category: Flores, A]]
[[Category: Hammarstrom, M.]]
[[Category: Graslund, S]]
[[Category: Holmberg-Schiavone, L.]]
[[Category: Hallberg, B M]]
[[Category: Johansson, I.]]
[[Category: Hammarstrom, M]]
[[Category: Kallas, A.]]
[[Category: Holmberg-Schiavone, L]]
[[Category: Karlberg, T.]]
[[Category: Johansson, I]]
[[Category: Kotenyova, T.]]
[[Category: Kallas, A]]
[[Category: Lehtio, L.]]
[[Category: Karlberg, T]]
[[Category: Moche, M.]]
[[Category: Kotenyova, T]]
[[Category: Nordlund, P.]]
[[Category: Lehtio, L]]
[[Category: Nyman, T.]]
[[Category: Moche, M]]
[[Category: Ogg, D.]]
[[Category: Nordlund, P]]
[[Category: Persson, C.]]
[[Category: Nyman, T]]
[[Category: Sagemark, J.]]
[[Category: Ogg, D]]
[[Category: Sgc, Structuralgenomicsconsortium.]]
[[Category: Persson, C]]
[[Category: Stenmark, P.]]
[[Category: Structural genomic]]
[[Category: Sundstrom, M.]]
[[Category: Sagemark, J]]
[[Category: Thorsell, A.G.]]
[[Category: Stenmark, P]]
[[Category: Van-Den-Berg, S.]]
[[Category: Sundstrom, M]]
[[Category: Weigelt, J.]]
[[Category: Thorsell, A G]]
[[Category: Welin, M.]]
[[Category: Weigelt, J]]
[[Category: U5P]]
[[Category: Welin, M]]
[[Category: alternative splicing]]
[[Category: Berg, S van der]]
[[Category: decarboxylase]]
[[Category: Decarboxylase]]
[[Category: disease mutation]]
[[Category: Disease mutation]]
[[Category: glycosyltransferase]]
[[Category: Glycosyltransferase]]
[[Category: lyase]]
[[Category: Lyase]]
[[Category: multifunctional enzyme]]
[[Category: Multifunctional enzyme]]
[[Category: polymorphism]]
[[Category: Pyrimidine biosynthesis]]
[[Category: pyrimidine biosynthesis]]
[[Category: Pyrimidine metabolism]]
[[Category: pyrimidine metabolism]]
[[Category: Transferase]]
[[Category: transferase]]
[[Category: Ump]]
[[Category: ump]]
 
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Retrieved from "https://proteopedia.org/2v30"