8xc4: Difference between revisions

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'''Unreleased structure'''


The entry 8xc4 is ON HOLD
==Nipah virus attachment glycoprotein head domain in complex with a broadly neutralizing antibody 1E5==
<StructureSection load='8xc4' size='340' side='right'caption='[[8xc4]], [[Resolution|resolution]] 3.24&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[8xc4]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Henipavirus_nipahense Henipavirus nipahense] and [https://en.wikipedia.org/wiki/Macaca_mulatta Macaca mulatta]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8XC4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8XC4 FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.24&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8xc4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8xc4 OCA], [https://pdbe.org/8xc4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8xc4 RCSB], [https://www.ebi.ac.uk/pdbsum/8xc4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8xc4 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q4VCP5_NIPAV Q4VCP5_NIPAV]
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
The Hendra and Nipah viruses (HNVs) are highly pathogenic pathogens without approved interventions for human use. In addition, the interaction pattern between the attachment (G) and fusion (F) glycoproteins required for virus entry remains unclear. Here, we isolate a panel of Macaca-derived G-specific antibodies that cross-neutralize HNVs via multiple mechanisms. The most potent antibody, 1E5, confers adequate protection against the Nipah virus challenge in female hamsters. Crystallography demonstrates that 1E5 has a highly similar binding pattern to the receptor. In cryo-electron microscopy studies, the tendency of 1E5 to bind to the upper or lower heads results in two distinct quaternary structures of G. Furthermore, we identify the extended outer loop beta1S2-beta1S3 of G and two pockets on the apical region of fusion (F) glycoprotein as the essential sites for G-F interactions. This work highlights promising drug candidates against HNVs and contributes deeper insights into the viruses.


Authors: Fan, P.F, Yu, C.M., Chen, W.
A potent Henipavirus cross-neutralizing antibody reveals a dynamic fusion-triggering pattern of the G-tetramer.,Fan P, Sun M, Zhang X, Zhang H, Liu Y, Yao Y, Li M, Fang T, Sun B, Chen Z, Chi X, Chen L, Peng C, Chen Z, Zhang G, Ren Y, Liu Z, Li Y, Li J, Li E, Guan W, Li S, Gong R, Zhang K, Yu C, Chiu S Nat Commun. 2024 May 21;15(1):4330. doi: 10.1038/s41467-024-48601-w. PMID:38773072<ref>PMID:38773072</ref>


Description: Nipah virus attachment glycoprotein head domain in complex with a boradly neutralizing antibody 1E5
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
[[Category: Unreleased Structures]]
</div>
[[Category: Chen, W]]
<div class="pdbe-citations 8xc4" style="background-color:#fffaf0;"></div>
[[Category: Fan, P.F, Yu, C.M]]
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Henipavirus nipahense]]
[[Category: Large Structures]]
[[Category: Macaca mulatta]]
[[Category: Chen W]]
[[Category: Fan PF]]
[[Category: Yu CM]]

Latest revision as of 05:53, 7 August 2024

Nipah virus attachment glycoprotein head domain in complex with a broadly neutralizing antibody 1E5

8xc4, resolution 3.24Å

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