8xcs: Difference between revisions

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~~'''Unreleased structure'''~~

~~The entry 8xcs is ON HOLD~~

==Cryo-EM structure of Glutamate dehydrogenase from Thermococcus profundus in complex with NADPH, AKG and NH4 in the initial stage of reaction==

~~Authors: Wakabayashi, T., Oide, M., Nakasako, M.~~

== Structural highlights ==

<table><tr><td colspan='2'>[[8xcs]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermococcus_profundus Thermococcus profundus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8XCS OCA]. For a guided tour on the structure components use [https://proteopedia.org/fgij/fg.htm?mol=8XCS FirstGlance].

~~Description:~~ Cryo-EM structure of Glutamate dehydrogenase from Thermococcus profundus in complex with NADPH, AKG and NH4 in the initial stage of reaction

</td></tr><tr id='method'><td class="sblockLbl">[[Empirical_models|Method:]]</td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.63Å</td></tr>

[[Category: ~~Unreleased~~ Structures]]

<tr id='ligand'><td class="sblockLbl">[[Ligand|Ligands:]]</td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AKG:2-OXOGLUTARIC+ACID'>AKG</scene>, <scene name='pdbligand=NDP:NADPH+DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NDP</scene>, <scene name='pdbligand=NH4:AMMONIUM+ION'>NH4</scene></td></tr>

[[Category: ~~Oide,~~ M]]

<tr id='resources'><td class="sblockLbl">Resources:</td><td class="sblockDat">[https://proteopedia.org/fgij/fg.htm?mol=8xcs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8xcs OCA], [https://pdbe.org/8xcs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8xcs RCSB], [https://www.ebi.ac.uk/pdbsum/8xcs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8xcs ProSAT]</td></tr>

[[Category: ~~Wakabayashi, T~~]]

</table>

[[Category: ~~Nakasako, M~~]]

== Function ==

[https://www.uniprot.org/uniprot/DHE3_THEPR DHE3_THEPR]

__TOC__

</StructureSection>

[[Category: Large Structures]]

[[Category: Thermococcus profundus]]

[[Category: Nakasako M]]

[[Category: Oide M]]

[[Category: Wakabayashi T]]

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@@ Line 1: / Line 1: @@
-'''Unreleased structure'''
-The entry 8xcs is ON HOLD
+==Cryo-EM structure of Glutamate dehydrogenase from Thermococcus profundus in complex with NADPH, AKG and NH4 in the initial stage of reaction==
+<StructureSection load='8xcs' size='340' side='right'caption='[[8xcs]], [[Resolution|resolution]] 2.63&Aring;' scene=''>
-Authors: Wakabayashi, T., Oide, M., Nakasako, M.
+== Structural highlights ==
+<table><tr><td colspan='2'>[[8xcs]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermococcus_profundus Thermococcus profundus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8XCS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8XCS FirstGlance]. <br>
-Description: Cryo-EM structure of Glutamate dehydrogenase from Thermococcus profundus in complex with NADPH, AKG and NH4 in the initial stage of reaction
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.63&#8491;</td></tr>
-[[Category: Unreleased Structures]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AKG:2-OXOGLUTARIC+ACID'>AKG</scene>, <scene name='pdbligand=NDP:NADPH+DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NDP</scene>, <scene name='pdbligand=NH4:AMMONIUM+ION'>NH4</scene></td></tr>
-[[Category: Oide, M]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8xcs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8xcs OCA], [https://pdbe.org/8xcs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8xcs RCSB], [https://www.ebi.ac.uk/pdbsum/8xcs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8xcs ProSAT]</span></td></tr>
-[[Category: Wakabayashi, T]]
+</table>
-[[Category: Nakasako, M]]
+== Function ==
+[https://www.uniprot.org/uniprot/DHE3_THEPR DHE3_THEPR]
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
+[[Category: Thermococcus profundus]]
+[[Category: Nakasako M]]
+[[Category: Oide M]]
+[[Category: Wakabayashi T]]