9cpz: Difference between revisions

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'''Unreleased structure'''


The entry 9cpz is ON HOLD
==C387S variant of D-ornithine/D-lysine decarboxylase complexed with PMP and 4-guanidinobutanal==
 
<StructureSection load='9cpz' size='340' side='right'caption='[[9cpz]], [[Resolution|resolution]] 1.54&Aring;' scene=''>
Authors: Phillips, R.S., Blankenship, S.
== Structural highlights ==
 
<table><tr><td colspan='2'>[[9cpz]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium Salmonella enterica subsp. enterica serovar Typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9CPZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9CPZ FirstGlance]. <br>
Description: C387S variant of D-ornithine/D-lysine decarboxylase complexed with PMP and 4-guanidinobutanal
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.54&#8491;</td></tr>
[[Category: Unreleased Structures]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=A1AZK:N-(4-oxobutyl)guanidine'>A1AZK</scene>, <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PMP:4-DEOXY-4-AMINOPYRIDOXAL-5-PHOSPHATE'>PMP</scene></td></tr>
[[Category: Blankenship, S]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9cpz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9cpz OCA], [https://pdbe.org/9cpz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9cpz RCSB], [https://www.ebi.ac.uk/pdbsum/9cpz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9cpz ProSAT]</span></td></tr>
[[Category: Phillips, R.S]]
</table>
== Function ==
[https://www.uniprot.org/uniprot/DOKDC_SALTY DOKDC_SALTY] Catalyzes the decarboxylation of D-ornithine and D-lysine (PubMed:29024617, PubMed:30699288). Ornithine is likely the physiological substrate (PubMed:29024617). Has no detectable diaminopimelate decarboxylase activity in vitro (PubMed:29024617).<ref>PMID:29024617</ref> <ref>PMID:30699288</ref>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Salmonella enterica subsp. enterica serovar Typhimurium]]
[[Category: Blankenship S]]
[[Category: Phillips RS]]
Retrieved from "https://proteopedia.org/9cpz"