9d0a: Difference between revisions
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New page: '''Unreleased structure''' The entry 9d0a is ON HOLD Authors: Lyu, Z., Lyu, X., McGrath, A.P., Kang, Y. Description: CryoEM structure of PAR2 with endogenous tethered ligand. [[Categor... |
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==CryoEM structure of PAR2 with endogenous tethered ligand.== | |||
<StructureSection load='9d0a' size='340' side='right'caption='[[9d0a]], [[Resolution|resolution]] 3.10Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[9d0a]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Unidentified Unidentified]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9D0A OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9D0A FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.1Å</td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9d0a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9d0a OCA], [https://pdbe.org/9d0a PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9d0a RCSB], [https://www.ebi.ac.uk/pdbsum/9d0a PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9d0a ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/GBB1_HUMAN GBB1_HUMAN] Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.<ref>PMID:18611381</ref> | |||
<div style="background-color:#fffaf0;"> | |||
== Publication Abstract from PubMed == | |||
Members of the proteinase-activated receptor (PAR) subfamily of G protein-coupled receptors (GPCRs) play critical roles in processes like hemostasis, thrombosis, development, wound healing, inflammation, and cancer progression. Comprising PAR1-PAR4, these receptors are specifically activated by protease cleavage at their extracellular amino terminus, revealing a 'tethered ligand' that self-activates the receptor. This triggers complex intracellular signaling via G proteins and beta-arrestins, linking external protease signals to cellular functions. To date, direct structural visualization of these ligand-receptor complexes has been limited. Here, we present structural snapshots of activated PAR1 and PAR2 bound to their endogenous tethered ligands, revealing a shallow and constricted orthosteric binding pocket. Comparisons with antagonist-bound structures show minimal conformational changes in the TM6 helix and larger movements of TM7 upon activation. These findings reveal a common activation mechanism for PAR1 and PAR2, highlighting critical residues involved in ligand recognition. Additionally, the structure of PAR2 bound to a pathway selective antagonist, GB88, demonstrates how potent orthosteric engagement can be achieved by a small molecule mimicking the endogenous tethered ligand's interactions. | |||
Structural basis for the activation of proteinase-activated receptors PAR1 and PAR2.,Lyu Z, Lyu X, Malyutin AG, Xia G, Carney D, Alves VM, Falk M, Arora N, Zou H, McGrath AP, Kang Y Nat Commun. 2025 Apr 26;16(1):3931. doi: 10.1038/s41467-025-59138-x. PMID:40287415<ref>PMID:40287415</ref> | |||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |||
[[Category: | </div> | ||
[[Category: | <div class="pdbe-citations 9d0a" style="background-color:#fffaf0;"></div> | ||
[[Category: Kang | == References == | ||
[[Category: Lyu | <references/> | ||
[[Category: | __TOC__ | ||
</StructureSection> | |||
[[Category: Homo sapiens]] | |||
[[Category: Large Structures]] | |||
[[Category: Unidentified]] | |||
[[Category: Kang Y]] | |||
[[Category: Lyu X]] | |||
[[Category: Lyu Z]] | |||
[[Category: McGrath AP]] | |||
Latest revision as of 17:58, 7 May 2025
CryoEM structure of PAR2 with endogenous tethered ligand.
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