9gle: Difference between revisions
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New page: '''Unreleased structure''' The entry 9gle is ON HOLD Authors: Fairhead, M., Strain-Damerell, C., Ye, M., Mackinnon, S.R., Pinkas, D., MacLean, E.M., Koekemoer, L., Damerell, D., Krojer,... |
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==Jumonji domain-containing protein 2A with crystallization epitope mutations A91T:T93S== | |||
<StructureSection load='9gle' size='340' side='right'caption='[[9gle]], [[Resolution|resolution]] 1.88Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[9gle]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9GLE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9GLE FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.88Å</td></tr> | |||
[[Category: | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
[[Category: | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9gle FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9gle OCA], [https://pdbe.org/9gle PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9gle RCSB], [https://www.ebi.ac.uk/pdbsum/9gle PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9gle ProSAT]</span></td></tr> | ||
[[Category: | </table> | ||
[[Category: | == Function == | ||
[[Category: | [https://www.uniprot.org/uniprot/KDM4A_HUMAN KDM4A_HUMAN] Histone demethylase that specifically demethylates 'Lys-9' and 'Lys-36' residues of histone H3, thereby playing a central role in histone code. Does not demethylate histone H3 'Lys-4', H3 'Lys-27' nor H4 'Lys-20'. Demethylates trimethylated H3 'Lys-9' and H3 'Lys-36' residue, while it has no activity on mono- and dimethylated residues. Demethylation of Lys residue generates formaldehyde and succinate. Participates in transcriptional repression of ASCL2 and E2F-responsive promoters via the recruitment of histone deacetylases and NCOR1, respectively.<ref>PMID:16024779</ref> <ref>PMID:16603238</ref> <ref>PMID:21694756</ref> Isoform 2: Crucial for muscle differentiation, promotes transcriptional activation of the Myog gene by directing the removal of repressive chromatin marks at its promoter. Lacks the N-terminal demethylase domain.<ref>PMID:16024779</ref> <ref>PMID:16603238</ref> <ref>PMID:21694756</ref> | ||
[[Category: | == References == | ||
[[Category: Fairhead | <references/> | ||
[[Category: | __TOC__ | ||
[[Category: Krojer | </StructureSection> | ||
[[Category: | [[Category: Homo sapiens]] | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: | [[Category: Arrowsmith CH]] | ||
[[Category: | [[Category: Bountra C]] | ||
[[Category: | [[Category: Burgess-Brown N]] | ||
[[Category: | [[Category: Damerell D]] | ||
[[Category: | [[Category: Edwards A]] | ||
[[Category: | [[Category: Fairhead M]] | ||
[[Category: Koekemoer L]] | |||
[[Category: Krojer T]] | |||
[[Category: MacLean EM]] | |||
[[Category: Mackinnon SR]] | |||
[[Category: Marsden B]] | |||
[[Category: Pinkas D]] | |||
[[Category: Strain-Damerell C]] | |||
[[Category: Ye M]] | |||
[[Category: Yue W]] | |||
[[Category: Von Delft F]] | |||
Latest revision as of 04:58, 18 September 2024
Jumonji domain-containing protein 2A with crystallization epitope mutations A91T:T93S
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