9lu9: Difference between revisions

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'''Unreleased structure'''


The entry 9lu9 is ON HOLD
==The chimeric flagellar motor complex between MotA1B1 from Paenibacillus sp. TCA20 and MotAB from E.coli, state 1==
<StructureSection load='9lu9' size='340' side='right'caption='[[9lu9]], [[Resolution|resolution]] 3.30&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[9lu9]] is a 7 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] and [https://en.wikipedia.org/wiki/Unclassified_Paenibacillus Unclassified Paenibacillus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9LU9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9LU9 FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.3&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AV0:(2~{R},3~{R},4~{S},5~{S},6~{R})-2-[(2~{R},3~{S},4~{R},5~{R},6~{R})-6-[2-decyl-2-[[(2~{R},3~{R},4~{R},5~{S},6~{R})-6-(hydroxymethyl)-5-[(2~{R},3~{R},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-3,4-bis(oxidanyl)oxan-2-yl]oxymethyl]dodecoxy]-2-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol'>AV0</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9lu9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9lu9 OCA], [https://pdbe.org/9lu9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9lu9 RCSB], [https://www.ebi.ac.uk/pdbsum/9lu9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9lu9 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/A0A069DFV9_9BACL A0A069DFV9_9BACL]
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
The bacterial flagellum, a complex nanomachine composed of numerous proteins, is utilized by bacteria for swimming in various environments and plays a crucial role in their survival and infection. The flagellar motor is composed of a rotor and stator complexes, with each stator unit functioning as an ion channel that converts flow from outside of cell membrane into rotational motion. Paenibacillus sp. TCA20 was discovered in a hot spring, and a structural analysis was conducted on the stator complex using cryo-electron microscopy to elucidate its function. Two of the three structures (Classes 1 and 3) were found to have structural properties typical for other stator complexes. In contrast, in Class 2 structures, the pentamer ring of the A subunits forms a C-shape, with lauryl maltose neopentyl glycol (LMNG) bound to the periplasmic side of the interface between the A and B subunits. This interface is conserved in all stator complexes, suggesting that hydrophobic ligands and lipids can bind to this interface, a feature that could potentially be utilized in the development of novel antibiotics aimed at regulating cell motility and infection.


Authors: Onoe, S., Nishikino, T., Kinoshita, M., Kishikawa, J., Kato, T.
Cryo-EM Structure of the Flagellar Motor Complex from Paenibacillus sp. TCA20.,Onoe S, Nishikino T, Kinoshita M, Takekawa N, Minamino T, Imada K, Namba K, Kishikawa JI, Kato T Biomolecules. 2025 Mar 18;15(3):435. doi: 10.3390/biom15030435. PMID:40149971<ref>PMID:40149971</ref>


Description: The chimeric flagellar motor complex between MotA1B1 from Paenibacillus sp. TCA20 and MotAB from E.coli, state 1
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
[[Category: Unreleased Structures]]
</div>
[[Category: Onoe, S]]
<div class="pdbe-citations 9lu9" style="background-color:#fffaf0;"></div>
[[Category: Kinoshita, M]]
== References ==
[[Category: Nishikino, T]]
<references/>
[[Category: Kishikawa, J]]
__TOC__
[[Category: Kato, T]]
</StructureSection>
[[Category: Escherichia coli]]
[[Category: Large Structures]]
[[Category: Unclassified Paenibacillus]]
[[Category: Kato T]]
[[Category: Kinoshita M]]
[[Category: Kishikawa J]]
[[Category: Nishikino T]]
[[Category: Onoe S]]
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