9m0f: Difference between revisions
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New page: '''Unreleased structure''' The entry 9m0f is ON HOLD Authors: Description: Category: Unreleased Structures |
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The | ==The crystal structure of BRD4-BDs in complex with H2A peptide== | ||
<StructureSection load='9m0f' size='340' side='right'caption='[[9m0f]], [[Resolution|resolution]] 2.61Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[9m0f]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9M0F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9M0F FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.61Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ALY:N(6)-ACETYLLYSINE'>ALY</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9m0f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9m0f OCA], [https://pdbe.org/9m0f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9m0f RCSB], [https://www.ebi.ac.uk/pdbsum/9m0f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9m0f ProSAT]</span></td></tr> | |||
</table> | |||
== Disease == | |||
[https://www.uniprot.org/uniprot/BRD4_HUMAN BRD4_HUMAN] Note=A chromosomal aberration involving BRD4 is found in a rare, aggressive, and lethal carcinoma arising in midline organs of young people. Translocation t(15;19)(q14;p13) with NUT which produces a BRD4-NUT fusion protein.<ref>PMID:12543779</ref> <ref>PMID:11733348</ref> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/BRD4_HUMAN BRD4_HUMAN] Plays a role in a process governing chromosomal dynamics during mitosis (By similarity). | |||
<div style="background-color:#fffaf0;"> | |||
== Publication Abstract from PubMed == | |||
Bromodomain-containing protein 4 (BRD4) is well characterized as a histone acetyllysine reader that plays critical roles in the regulation of oncogene transcription. Additionally, BRD4 has been shown to be involved in DNA repair and telomere maintenance in a transcriptionally independent manner. Our previous study revealed that BRD4 inhibits non-homologous end-joining (NHEJ) DNA repair by recognizing the histone H2AK5acK9ac hyperacetylation at DSB sites through its tandem bromodomains (BD1 and BD2), resulting in the accumulation of the BRD4-KU80 protein that impedes the assembly of the DNA repair machinery in mitotic deacetylase complex (MiDAC)-deficient cells. Here we report the structural basis for the recognition of H2AK5acK9ac by BD1 and BD1-BD2 domains, respectively. In particular, we show that Leu92 in BD1 is a key determinant of the H2AK5acK9ac specificity over other diacetyllysine marks on H4, and it negatively regulates NHEJ repair to promote genomic instability in MiDAC-deficient cells. These results reveal a previously unrecognized mode of BRD4-histone interaction and its functional consequences that make a meaningful contribution to chromatin biology and DNA repair. | |||
Structural mechanism of diacetylated histone H2A recognition by Bromodomain-containing protein 4 in Regulation of non-homologous end-joining DNA repair.,Wang X, Ji J, Ma Y, Liu L, Bao K, Yang H, Li Z, Li T, Shi L, Yang N Int J Biol Macromol. 2026 Jun;368:152638. doi: 10.1016/j.ijbiomac.2026.152638. , Epub 2026 May 22. PMID:42173225<ref>PMID:42173225</ref> | |||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |||
[[Category: | </div> | ||
<div class="pdbe-citations 9m0f" style="background-color:#fffaf0;"></div> | |||
== References == | |||
<references/> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Homo sapiens]] | |||
[[Category: Large Structures]] | |||
[[Category: Ji JH]] | |||
[[Category: Li ZB]] | |||
[[Category: Wang XD]] | |||
[[Category: Yang HW]] | |||
[[Category: Yang N]] | |||
Latest revision as of 12:45, 1 July 2026
The crystal structure of BRD4-BDs in complex with H2A peptide
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