9nyd: Difference between revisions
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New page: '''Unreleased structure''' The entry 9nyd is ON HOLD Authors: Morgan, R.T., Motta, S., Gil-Iturbe, E., di Muccio, G., Bhattacharjee, B., Romagnoli, A., Anwar, M.T., Mishra, B., Ashraf, ... |
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==Cryo-EM structure of the glycosyltransferase GtrB in the pre-catalysis and product-bound state== | |||
<StructureSection load='9nyd' size='340' side='right'caption='[[9nyd]], [[Resolution|resolution]] 2.85Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[9nyd]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Synechocystis_sp._PCC_6803_substr._Kazusa Synechocystis sp. PCC 6803 substr. Kazusa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9NYD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9NYD FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.85Å</td></tr> | |||
[[Category: | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5TR:[(2~{E},6~{E},10~{E},14~{E},18~{Z},22~{E},26~{Z},30~{E},34~{E},38~{E})-3,7,11,15,19,23,27,31,35,39,43-UNDECAMETHYLTETRATETRACONTA-2,6,10,14,18,22,26,30,34,38,42-UNDECAENYL]+DIHYDROGEN+PHOSPHATE'>5TR</scene>, <scene name='pdbligand=A1B94:[(2~{S},3~{S},4~{R},5~{S},6~{S})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]+[(2~{Z},6~{E})-3,7,11,15,19,23,27,31,35,39,43-undecamethyltetratetraconta-2,6,10,14,18,22,26,30,34,38,42-undecaenyl]+hydrogen+phosphate'>A1B94</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene>, <scene name='pdbligand=UPG:URIDINE-5-DIPHOSPHATE-GLUCOSE'>UPG</scene></td></tr> | ||
[[Category: Anwar | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9nyd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9nyd OCA], [https://pdbe.org/9nyd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9nyd RCSB], [https://www.ebi.ac.uk/pdbsum/9nyd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9nyd ProSAT]</span></td></tr> | ||
[[Category: | </table> | ||
[[Category: | == Function == | ||
[[Category: | [https://www.uniprot.org/uniprot/Y501_SYNY3 Y501_SYNY3] | ||
[[Category: | __TOC__ | ||
[[Category: | </StructureSection> | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: | [[Category: Synechocystis sp. PCC 6803 substr. Kazusa]] | ||
[[Category: Morgan | [[Category: Anwar MT]] | ||
[[Category: | [[Category: Ashraf K]] | ||
[[Category: | [[Category: Bang I]] | ||
[[Category: | [[Category: Bhattacharjee B]] | ||
[[Category: | [[Category: Gil-Iturbe E]] | ||
[[Category: | [[Category: Lowary TL]] | ||
[[Category: | [[Category: Mancia F]] | ||
[[Category: Di Marino | [[Category: Mishra B]] | ||
[[Category: | [[Category: Morgan RT]] | ||
[[Category: Motta S]] | |||
[[Category: Nygaard R]] | |||
[[Category: Petrou VI]] | |||
[[Category: Quick M]] | |||
[[Category: Romagnoli A]] | |||
[[Category: Stowell MHB]] | |||
[[Category: Di Marino D]] | |||
[[Category: Di Muccio G]] | |||
Latest revision as of 05:46, 24 December 2025
Cryo-EM structure of the glycosyltransferase GtrB in the pre-catalysis and product-bound state
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