24ic: Difference between revisions

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Created page with "'''Unreleased structure''' The entry 24ic is ON HOLD Authors: Tang, M.L., Yan, H.R., Ma, Y.Z., Sun, N.N. Description: Crystal structure of human RIPK1 kinase domain in complex with compound HR10 Category: Unreleased Structures Category: Tang, M.L Category: Sun, N.N Category: Ma, Y.Z Category: Yan, H.R"
 
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'''Unreleased structure'''


The entry 24ic is ON HOLD
==Crystal structure of human RIPK1 kinase domain in complex with compound HR97==
 
<StructureSection load='24ic' size='340' side='right'caption='[[24ic]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
Authors: Tang, M.L., Yan, H.R., Ma, Y.Z., Sun, N.N.
== Structural highlights ==
 
<table><tr><td colspan='2'>[[24ic]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=24IC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=24IC FirstGlance]. <br>
Description: Crystal structure of human RIPK1 kinase domain in complex with compound HR10
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
[[Category: Unreleased Structures]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=A1E6R:(3~{S})-~{N}-(cyclopropylmethyl)-5-methyl-4-oxidanylidene-3-[[5-(phenylmethyl)-4~{H}-1,2,4-triazol-3-yl]carbonylamino]-2,3-dihydro-1,5-benzoxazepine-7-carboxamide'>A1E6R</scene></td></tr>
[[Category: Tang, M.L]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=24ic FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=24ic OCA], [https://pdbe.org/24ic PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=24ic RCSB], [https://www.ebi.ac.uk/pdbsum/24ic PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=24ic ProSAT]</span></td></tr>
[[Category: Sun, N.N]]
</table>
[[Category: Ma, Y.Z]]
== Function ==
[[Category: Yan, H.R]]
[https://www.uniprot.org/uniprot/RIPK1_HUMAN RIPK1_HUMAN] Serine-threonine kinase which transduces inflammatory and cell-death signals (programmed necrosis) following death receptors ligation, activation of pathogen recognition receptors (PRRs), and DNA damage. Upon activation of TNFR1 by the TNF-alpha family cytokines, TRADD and TRAF2 are recruited to the receptor. Ubiquitination by TRAF2 via 'Lys-63'-link chains acts as a critical enhancer of communication with downstream signal transducers in the mitogen-activated protein kinase pathway and the NF-kappa-B pathway, which in turn mediate downstream events including the activation of genes encoding inflammatory molecules. Polyubiquitinated protein binds to IKBKG/NEMO, the regulatory subunit of the IKK complex, a critical event for NF-kappa-B activation. Interaction with other cellular RHIM-containing adapters initiates gene activation and cell death. RIPK1 and RIPK3 association, in particular, forms a necrosis-inducing complex.<ref>PMID:11101870</ref> <ref>PMID:19524513</ref> <ref>PMID:19524512</ref>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Ma YZ]]
[[Category: Sun NN]]
[[Category: Tang ML]]
[[Category: Yan HR]]
Retrieved from "https://proteopedia.org/24ic"