1ydu: Difference between revisions

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[[Image:1ydu.gif|left|200px]]


<!--
==Solution NMR structure of At5g01610, an Arabidopsis thaliana protein containing DUF538 domain==
The line below this paragraph, containing "STRUCTURE_1ydu", creates the "Structure Box" on the page.
<StructureSection load='1ydu' size='340' side='right'caption='[[1ydu]]' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1ydu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YDU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YDU FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ydu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ydu OCA], [https://pdbe.org/1ydu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ydu RCSB], [https://www.ebi.ac.uk/pdbsum/1ydu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ydu ProSAT], [https://www.topsan.org/Proteins/CESG/1ydu TOPSAN]</span></td></tr>
{{STRUCTURE_1ydu|  PDB=1ydu  |  SCENE= }}
</table>
 
== Function ==
'''Solution NMR structure of At5g01610, an Arabidopsis thaliana protein containing DUF538 domain'''
[https://www.uniprot.org/uniprot/Y5161_ARATH Y5161_ARATH]
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
1YDU is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YDU OCA].  
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yd/1ydu_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ydu ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Arabidopsis thaliana]]
[[Category: Arabidopsis thaliana]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: CESG, Center for Eukaryotic Structural Genomics.]]
[[Category: Cornilescu CC]]
[[Category: Cornilescu, C.]]
[[Category: Lee MS]]
[[Category: Lee, M S.]]
[[Category: Markley JL]]
[[Category: Markley, J L.]]
[[Category: Zhao Q]]
[[Category: Zhao, Q.]]
[[Category: Arabidopsis]]
[[Category: Center for eukaryotic structural genomic]]
[[Category: Cesg]]
[[Category: Duf538]]
[[Category: Protein structure initiative]]
[[Category: Structural genomic]]
[[Category: Unknown function]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 16:12:03 2008''
Retrieved from "https://proteopedia.org/1ydu"