1yw0: Difference between revisions

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[[Image:1yw0.gif|left|200px]]


<!--
==Crystal structure of the tryptophan 2,3-dioxygenase from Xanthomonas campestris. Northeast Structural Genomics Target XcR13.==
The line below this paragraph, containing "STRUCTURE_1yw0", creates the "Structure Box" on the page.
<StructureSection load='1yw0' size='340' side='right'caption='[[1yw0]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1yw0]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Xanthomonas_campestris_pv._campestris_str._ATCC_33913 Xanthomonas campestris pv. campestris str. ATCC 33913]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YW0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YW0 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_1yw0| PDB=1yw0 |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yw0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yw0 OCA], [https://pdbe.org/1yw0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yw0 RCSB], [https://www.ebi.ac.uk/pdbsum/1yw0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yw0 ProSAT], [https://www.topsan.org/Proteins/NESGC/1yw0 TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/T23O_XANCP T23O_XANCP] Catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring.[HAMAP-Rule:MF_01972]<ref>PMID:17197414</ref> <ref>PMID:18783250</ref>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yw/1yw0_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yw0 ConSurf].
<div style="clear:both"></div>


'''Crystal structure of the tryptophan 2,3-dioxygenase from Xanthomonas campestris. Northeast Structural Genomics Target XcR13.'''
==See Also==
 
*[[Dioxygenase 3D structures|Dioxygenase 3D structures]]
 
== References ==
==About this Structure==
<references/>
1YW0 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Xanthomonas_campestris_pv._campestris_str._atcc_33913 Xanthomonas campestris pv. campestris str. atcc 33913]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YW0 OCA].
__TOC__
[[Category: Single protein]]
</StructureSection>
[[Category: Tryptophan 2,3-dioxygenase]]
[[Category: Large Structures]]
[[Category: Xanthomonas campestris pv. campestris str. atcc 33913]]
[[Category: Xanthomonas campestris pv. campestris str. ATCC 33913]]
[[Category: Abashidze, M.]]
[[Category: Abashidze M]]
[[Category: Aton, T B.]]
[[Category: Aton TB]]
[[Category: Ciano, M.]]
[[Category: Ciano M]]
[[Category: Forouhar, F.]]
[[Category: Forouhar F]]
[[Category: Hunt, J F.]]
[[Category: Hunt JF]]
[[Category: Kuzin, A.]]
[[Category: Kuzin A]]
[[Category: Montelione, G T.]]
[[Category: Montelione GT]]
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Tong L]]
[[Category: Tong, L.]]
[[Category: Vorobiev SM]]
[[Category: Vorobiev, S M.]]
[[Category: Xiao R]]
[[Category: Xiao, R.]]
[[Category: Dioxygenase]]
[[Category: Nesg]]
[[Category: Northeast structural genomics consortium]]
[[Category: Protein structure initiative]]
[[Category: Psi]]
[[Category: Structural genomic]]
[[Category: Tryptophan]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 16:51:51 2008''
Retrieved from "https://proteopedia.org/1yw0"