2cs8: Difference between revisions
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New page: left|200px<br /> <applet load="2cs8" size="450" color="white" frame="true" align="right" spinBox="true" caption="2cs8" /> '''Solution structure of tandem repeat of the ... |
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== | ==Solution structure of tandem repeat of the fifth and sixth zinc-finger C2HC domains from human ST18== | ||
<StructureSection load='2cs8' size='340' side='right'caption='[[2cs8]]' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[2cs8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CS8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CS8 FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cs8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cs8 OCA], [https://pdbe.org/2cs8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cs8 RCSB], [https://www.ebi.ac.uk/pdbsum/2cs8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cs8 ProSAT], [https://www.topsan.org/Proteins/RSGI/2cs8 TOPSAN]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/ST18_HUMAN ST18_HUMAN] Repressor that binds to DNA sequences containing a bipartite element consisting of a direct repeat of the sequence 5'-AAAGTTT-3' separated by 2-9 nucleotides. Represses basal transcription activity from target promoters (By similarity). Inhibits colony formation in cultured breast cancer cells. | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cs/2cs8_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cs8 ConSurf]. | |||
<div style="clear:both"></div> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: Hayashi | [[Category: Hayashi F]] | ||
[[Category: Nagashima | [[Category: Nagashima T]] | ||
[[Category: Suetake T]] | |||
[[Category: Suetake | [[Category: Yokoyama S]] | ||
[[Category: Yokoyama | |||
Latest revision as of 11:30, 22 May 2024
Solution structure of tandem repeat of the fifth and sixth zinc-finger C2HC domains from human ST18
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