2dks: Difference between revisions

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New page: left|200px<br /> <applet load="2dks" size="450" color="white" frame="true" align="right" spinBox="true" caption="2dks" /> '''Solution structure of the first IG-like dom...
 
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[[Image:2dks.gif|left|200px]]<br />
<applet load="2dks" size="450" color="white" frame="true" align="right" spinBox="true"
caption="2dks" />
'''Solution structure of the first IG-like domain of human carcinoembryonic antigen related cell adhesion molecule 8'''<br />


==About this Structure==
==Solution structure of the first IG-like domain of human carcinoembryonic antigen related cell adhesion molecule 8==
2DKS is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2DKS OCA].  
<StructureSection load='2dks' size='340' side='right'caption='[[2dks]]' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[2dks]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DKS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DKS FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dks FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dks OCA], [https://pdbe.org/2dks PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dks RCSB], [https://www.ebi.ac.uk/pdbsum/2dks PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dks ProSAT], [https://www.topsan.org/Proteins/RSGI/2dks TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/CEAM8_HUMAN CEAM8_HUMAN]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dk/2dks_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dks ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Hayashi, F.]]
[[Category: Hayashi F]]
[[Category: Nagashima, K.]]
[[Category: Nagashima K]]
[[Category: RSGI, RIKEN.Structural.Genomics/Proteomics.Initiative.]]
[[Category: Yokoyama S]]
[[Category: Yokoyama, S.]]
[[Category: Yoshida M]]
[[Category: Yoshida, M.]]
[[Category: antigen cd67]]
[[Category: beta-sandwich]]
[[Category: carcinoembryonic antigen cgm6]]
[[Category: cd66b antigen]]
[[Category: ig-fold]]
[[Category: national project on protein structural and functional analyses]]
[[Category: nonspecific cross-reacting antigen nca-95]]
[[Category: nppsfa]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: rsgi]]
[[Category: structural genomics]]
 
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Mon Nov 12 21:35:07 2007''
Retrieved from "https://proteopedia.org/2dks"