2ebu: Difference between revisions

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New page: left|200px<br /> <applet load="2ebu" size="450" color="white" frame="true" align="right" spinBox="true" caption="2ebu" /> '''Solution structure of the BRCT domain from ...
 
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[[Image:2ebu.gif|left|200px]]<br />
<applet load="2ebu" size="450" color="white" frame="true" align="right" spinBox="true"
caption="2ebu" />
'''Solution structure of the BRCT domain from human replication factor C large subunit 1'''<br />


==About this Structure==
==Solution structure of the BRCT domain from human replication factor C large subunit 1==
2EBU is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2EBU OCA].  
<StructureSection load='2ebu' size='340' side='right'caption='[[2ebu]]' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[2ebu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EBU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EBU FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ebu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ebu OCA], [https://pdbe.org/2ebu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ebu RCSB], [https://www.ebi.ac.uk/pdbsum/2ebu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ebu ProSAT], [https://www.topsan.org/Proteins/RSGI/2ebu TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/RFC1_HUMAN RFC1_HUMAN] The elongation of primed DNA templates by DNA polymerase delta and epsilon requires the action of the accessory proteins PCNA and activator 1. This subunit binds to the primer-template junction. Binds the PO-B transcription element as well as other GA rich DNA sequences. Could play a role in DNA transcription regulation as well as DNA replication and/or repair. Can bind single- or double-stranded DNA.<ref>PMID:8999859</ref>  Interacts with C-terminus of PCNA. 5' phosphate residue is required for binding of the N-terminal DNA-binding domain to duplex DNA, suggesting a role in recognition of non-primer template DNA structures during replication and/or repair.<ref>PMID:8999859</ref>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eb/2ebu_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ebu ConSurf].
<div style="clear:both"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Hayashi, F.]]
[[Category: Hayashi F]]
[[Category: Nagashima, T.]]
[[Category: Nagashima T]]
[[Category: RSGI, RIKEN.Structural.Genomics/Proteomics.Initiative.]]
[[Category: Yokoyama S]]
[[Category: Yokoyama, S.]]
[[Category: a/b/a 3 layers]]
[[Category: clamp loader]]
[[Category: dna replication]]
[[Category: national project on protein structural and functional analyses]]
[[Category: nppsfa]]
[[Category: parallel beta-sheet]]
[[Category: rfc1]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: rsgi]]
[[Category: structural genomics]]
 
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Retrieved from "https://proteopedia.org/2ebu"