2eez: Difference between revisions

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[[Image:2eez.gif|left|200px]]


<!--
==Crystal structure of alanine dehydrogenase from themus thermophilus==
The line below this paragraph, containing "STRUCTURE_2eez", creates the "Structure Box" on the page.
<StructureSection load='2eez' size='340' side='right'caption='[[2eez]], [[Resolution|resolution]] 2.71&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2eez]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EEZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EEZ FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.71&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2eez FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eez OCA], [https://pdbe.org/2eez PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2eez RCSB], [https://www.ebi.ac.uk/pdbsum/2eez PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2eez ProSAT], [https://www.topsan.org/Proteins/RSGI/2eez TOPSAN]</span></td></tr>
{{STRUCTURE_2eez|  PDB=2eez  |  SCENE= }}
</table>
 
== Function ==
'''Crystal structure of alanine dehydrogenase from themus thermophilus'''
[https://www.uniprot.org/uniprot/Q5SLS7_THET8 Q5SLS7_THET8]  
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
2EEZ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EEZ OCA].  
  <jmolCheckbox>
[[Category: Alanine dehydrogenase]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ee/2eez_consurf.spt"</scriptWhenChecked>
[[Category: Single protein]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Thermus thermophilus]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Karthe, P.]]
  </jmolCheckbox>
[[Category: Kumarevel, T S.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2eez ConSurf].
[[Category: Kuramitsu, S.]]
<div style="clear:both"></div>
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
__TOC__
[[Category: Yokoyama, S.]]
</StructureSection>
[[Category: Alanine dehydrogenase]]
[[Category: Large Structures]]
[[Category: National project on protein structural and functional analyse]]
[[Category: Thermus thermophilus HB8]]
[[Category: Nppsfa]]
[[Category: Karthe P]]
[[Category: Oxidoreductase]]
[[Category: Kumarevel TS]]
[[Category: Riken structural genomics/proteomics initiative]]
[[Category: Kuramitsu S]]
[[Category: Rsgi]]
[[Category: Yokoyama S]]
[[Category: Structural genomic]]
[[Category: Thermus]]
[[Category: Ttha0216]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 02:27:01 2008''
Retrieved from "https://proteopedia.org/2eez"