2emo: Difference between revisions

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[[Image:2emo.jpg|left|200px]]


<!--
==GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT==
The line below this paragraph, containing "STRUCTURE_2emo", creates the "Structure Box" on the page.
<StructureSection load='2emo' size='340' side='right'caption='[[2emo]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2emo]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aequorea_victoria Aequorea victoria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EMO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EMO FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CSH:[2-(2-HYDROXY-1-METHYL-ETHYL)-4-(1H-IMIDAZOL-4-YLMETHYL)-5-OXO-IMIDAZOLIDIN-1-YL]-ACETIC+ACID'>CSH</scene></td></tr>
{{STRUCTURE_2emo| PDB=2emo |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2emo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2emo OCA], [https://pdbe.org/2emo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2emo RCSB], [https://www.ebi.ac.uk/pdbsum/2emo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2emo ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/GFP_AEQVI GFP_AEQVI] Energy-transfer acceptor. Its role is to transduce the blue chemiluminescence of the protein aequorin into green fluorescent light by energy transfer. Fluoresces in vivo upon receiving energy from the Ca(2+)-activated photoprotein aequorin.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/em/2emo_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2emo ConSurf].
<div style="clear:both"></div>


'''GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT'''
==See Also==
 
*[[Green Fluorescent Protein 3D structures|Green Fluorescent Protein 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
2EMO is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Aequorea_victoria Aequorea victoria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EMO OCA].
 
==Reference==
The structural basis for spectral variations in green fluorescent protein., Palm GJ, Zdanov A, Gaitanaris GA, Stauber R, Pavlakis GN, Wlodawer A, Nat Struct Biol. 1997 May;4(5):361-5. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/9145105 9145105]
[[Category: Aequorea victoria]]
[[Category: Aequorea victoria]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Palm, G.]]
[[Category: Palm G]]
[[Category: Wlodawer, A.]]
[[Category: Wlodawer A]]
[[Category: Zdanov, A.]]
[[Category: Zdanov A]]
[[Category: Beta-barrel]]
[[Category: Bioluminescence]]
[[Category: Fluorescent protein]]
[[Category: Luminescence]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 02:47:52 2008''

Latest revision as of 07:53, 23 October 2024

GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT

2emo, resolution 2.60Å

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