2jxp: Difference between revisions

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[[Image:2jxp.jpg|left|200px]]


<!--
==Solution NMR structure of uncharacterized lipoprotein B from Nitrosomonas europaea. Northeast Structural Genomics target NeR45A==
The line below this paragraph, containing "STRUCTURE_2jxp", creates the "Structure Box" on the page.
<StructureSection load='2jxp' size='340' side='right'caption='[[2jxp]]' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2jxp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Nitrosomonas_europaea_ATCC_19718 Nitrosomonas europaea ATCC 19718]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JXP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JXP FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jxp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jxp OCA], [https://pdbe.org/2jxp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jxp RCSB], [https://www.ebi.ac.uk/pdbsum/2jxp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jxp ProSAT], [https://www.topsan.org/Proteins/NESGC/2jxp TOPSAN]</span></td></tr>
{{STRUCTURE_2jxp|  PDB=2jxp  |  SCENE= }}
</table>
 
== Function ==
'''Solution NMR structure of uncharacterized lipoprotein B from Nitrosomonas europaea. Northeast Structural Genomics target NeR45A'''
[https://www.uniprot.org/uniprot/Q82VF2_NITEU Q82VF2_NITEU] Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane (By similarity).[HAMAP-Rule:MF_01186]
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
2JXP is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Nitrosomonas_europaea_atcc_19718 Nitrosomonas europaea atcc 19718]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JXP OCA].  
  <jmolCheckbox>
[[Category: Nitrosomonas europaea atcc 19718]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jx/2jxp_consurf.spt"</scriptWhenChecked>
[[Category: Single protein]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Acton, T B.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Baran, M C.]]
  </jmolCheckbox>
[[Category: Janjua, H.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2jxp ConSurf].
[[Category: Montelione, G T.]]
<div style="clear:both"></div>
[[Category: NESG, Northeast Structural Genomics Consortium.]]
__TOC__
[[Category: Owens, L.]]
</StructureSection>
[[Category: Rossi, P.]]
[[Category: Large Structures]]
[[Category: Rost, B.]]
[[Category: Nitrosomonas europaea ATCC 19718]]
[[Category: Swapna, G.]]
[[Category: Acton TB]]
[[Category: Wang, D.]]
[[Category: Baran MC]]
[[Category: Xiao, R.]]
[[Category: Janjua H]]
[[Category: Nesg]]
[[Category: Montelione GT]]
[[Category: Nmr structure]]
[[Category: Owens L]]
[[Category: Northeast structural genomics consortium]]
[[Category: Rossi P]]
[[Category: Protein structure initiative]]
[[Category: Rost B]]
[[Category: Psi-2]]
[[Category: Swapna G]]
[[Category: Uncharacterized lipoprotein b]]
[[Category: Wang D]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 09:22:56 2008''
[[Category: Xiao R]]

Latest revision as of 19:07, 29 May 2024

Solution NMR structure of uncharacterized lipoprotein B from Nitrosomonas europaea. Northeast Structural Genomics target NeR45A

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