2ncm: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(9 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2ncm.jpg|left|200px]]


<!--
==NEURAL CELL ADHESION MOLECULE, NMR, 20 STRUCTURES==
The line below this paragraph, containing "STRUCTURE_2ncm", creates the "Structure Box" on the page.
<StructureSection load='2ncm' size='340' side='right'caption='[[2ncm]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2ncm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1ncm 1ncm]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NCM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NCM FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ncm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ncm OCA], [https://pdbe.org/2ncm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ncm RCSB], [https://www.ebi.ac.uk/pdbsum/2ncm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ncm ProSAT]</span></td></tr>
-->
</table>
{{STRUCTURE_2ncm|  PDB=2ncm |  SCENE= }}
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
'''NEURAL CELL ADHESION MOLECULE, NMR, 20 STRUCTURES'''
Check<jmol>
 
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nc/2ncm_consurf.spt"</scriptWhenChecked>
==About this Structure==
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
2NCM is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1ncm 1ncm]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NCM OCA].  
    <text>to colour the structure by Evolutionary Conservation</text>
 
  </jmolCheckbox>
==Reference==
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ncm ConSurf].
The three-dimensional structure of the first domain of neural cell adhesion molecule., Thomsen NK, Soroka V, Jensen PH, Berezin V, Kiselyov VV, Bock E, Poulsen FM, Nat Struct Biol. 1996 Jul;3(7):581-5. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/8673600 8673600]
<div style="clear:both"></div>
[[Category: Mus musculus]]
__TOC__
[[Category: Single protein]]
</StructureSection>
[[Category: Poulsen, F M.]]
[[Category: Large Structures]]
[[Category: Thomsen, N K.]]
[[Category: Lk3 transgenic mice]]
[[Category: Poulsen, F M]]
[[Category: Thomsen, N K]]
[[Category: Cell adhesion]]
[[Category: Cell adhesion]]
[[Category: Glycoprotein]]
[[Category: Glycoprotein]]
Line 27: Line 28:
[[Category: Immunoglobulin fold]]
[[Category: Immunoglobulin fold]]
[[Category: Neural adhesion molecule]]
[[Category: Neural adhesion molecule]]
[[Category: Signal]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 09:35:39 2008''