2nwh: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(9 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2nwh.jpg|left|200px]]


<!--
==Carbohydrate kinase from Agrobacterium tumefaciens==
The line below this paragraph, containing "STRUCTURE_2nwh", creates the "Structure Box" on the page.
<StructureSection load='2nwh' size='340' side='right'caption='[[2nwh]], [[Resolution|resolution]] 1.86&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2nwh]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NWH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NWH FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.86&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
{{STRUCTURE_2nwh|  PDB=2nwh |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2nwh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nwh OCA], [https://pdbe.org/2nwh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2nwh RCSB], [https://www.ebi.ac.uk/pdbsum/2nwh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2nwh ProSAT], [https://www.topsan.org/Proteins/MCSG/2nwh TOPSAN]</span></td></tr>
 
</table>
'''Carbohydrate kinase from Agrobacterium tumefaciens'''
== Function ==
 
[https://www.uniprot.org/uniprot/A9CII5_AGRFC A9CII5_AGRFC]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
2NWH is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NWH OCA].  
Check<jmol>
[[Category: Agrobacterium tumefaciens]]
  <jmolCheckbox>
[[Category: Single protein]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nw/2nwh_consurf.spt"</scriptWhenChecked>
[[Category: Edwards, A.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Gu, J.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Joachimiak, A.]]
  </jmolCheckbox>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2nwh ConSurf].
[[Category: Osipiuk, J.]]
<div style="clear:both"></div>
[[Category: Savchenko, A.]]
__TOC__
[[Category: Xu, X.]]
</StructureSection>
[[Category: Apc6199]]
[[Category: Agrobacterium fabrum str. C58]]
[[Category: Carbohydrate kinase]]
[[Category: Large Structures]]
[[Category: Mcsg]]
[[Category: Edwards A]]
[[Category: Midwest center for structural genomic]]
[[Category: Gu J]]
[[Category: Protein structure initiative 2]]
[[Category: Joachimiak A]]
[[Category: Psi-2]]
[[Category: Osipiuk J]]
[[Category: Structural genomic]]
[[Category: Savchenko A]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 09:59:51 2008''
[[Category: Xu X]]