2p1j: Difference between revisions

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[[Image:2p1j.gif|left|200px]]


<!--
==Crystal structure of a polC-type DNA polymerase III exonuclease domain from Thermotoga maritima==
The line below this paragraph, containing "STRUCTURE_2p1j", creates the "Structure Box" on the page.
<StructureSection load='2p1j' size='340' side='right'caption='[[2p1j]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2p1j]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima_MSB8 Thermotoga maritima MSB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P1J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P1J FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p1j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p1j OCA], [https://pdbe.org/2p1j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p1j RCSB], [https://www.ebi.ac.uk/pdbsum/2p1j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p1j ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2p1j TOPSAN]</span></td></tr>
{{STRUCTURE_2p1j| PDB=2p1j |  SCENE= }}
</table>
== Function ==
[https://www.uniprot.org/uniprot/DPO3_THEMA DPO3_THEMA] Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p1/2p1j_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p1j ConSurf].
<div style="clear:both"></div>


'''Crystal structure of a polC-type DNA polymerase III exonuclease domain from Thermotoga maritima'''
==See Also==
 
*[[DNA polymerase 3D structures|DNA polymerase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
2P1J is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P1J OCA].
[[Category: Large Structures]]
[[Category: DNA-directed DNA polymerase]]
[[Category: Thermotoga maritima MSB8]]
[[Category: Single protein]]
[[Category: Almo SC]]
[[Category: Thermotoga maritima]]
[[Category: Bain KT]]
[[Category: Almo, S C.]]
[[Category: Bonanno JB]]
[[Category: Bain, K T.]]
[[Category: Burley SK]]
[[Category: Bonanno, J B.]]
[[Category: Izuka M]]
[[Category: Burley, S K.]]
[[Category: Rutter M]]
[[Category: Izuka, M.]]
[[Category: Sauder JM]]
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
[[Category: Smith D]]
[[Category: Rutter, M.]]
[[Category: Sridhar V]]
[[Category: Sauder, M J.]]
[[Category: Wasserman S]]
[[Category: Smith, D.]]
[[Category: Sridhar, V.]]
[[Category: Wasserman, S.]]
[[Category: Exonuclease]]
[[Category: New york structural genomix research consortium]]
[[Category: Nysgxrc]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Structural genomic]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 12:08:32 2008''
Retrieved from "https://proteopedia.org/2p1j"