2qip: Difference between revisions

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[[Image:2qip.gif|left|200px]]


<!--
==Crystal structure of a protein of unknown function VPA0982 from Vibrio parahaemolyticus RIMD 2210633==
The line below this paragraph, containing "STRUCTURE_2qip", creates the "Structure Box" on the page.
<StructureSection load='2qip' size='340' side='right'caption='[[2qip]], [[Resolution|resolution]] 1.48&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2qip]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_parahaemolyticus_RIMD_2210633 Vibrio parahaemolyticus RIMD 2210633]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QIP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QIP FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.48&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_2qip|  PDB=2qip  |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qip FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qip OCA], [https://pdbe.org/2qip PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qip RCSB], [https://www.ebi.ac.uk/pdbsum/2qip PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qip ProSAT], [https://www.topsan.org/Proteins/MCSG/2qip TOPSAN]</span></td></tr>
 
</table>
'''Crystal structure of a protein of unknown function VPA0982 from Vibrio parahaemolyticus RIMD 2210633'''
== Function ==
 
[https://www.uniprot.org/uniprot/Q9AF14_VIBPH Q9AF14_VIBPH]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
2QIP is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Vibrio_parahaemolyticus_rimd_2210633 Vibrio parahaemolyticus rimd 2210633]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QIP OCA].  
Check<jmol>
[[Category: Single protein]]
  <jmolCheckbox>
[[Category: Vibrio parahaemolyticus rimd 2210633]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qi/2qip_consurf.spt"</scriptWhenChecked>
[[Category: Duggan, E.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Joachimiak, A.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
  </jmolCheckbox>
[[Category: Moy, S.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qip ConSurf].
[[Category: Tan, K.]]
<div style="clear:both"></div>
[[Category: Apc85975]]
__TOC__
[[Category: Mcsg]]
</StructureSection>
[[Category: Midwest center for structural genomic]]
[[Category: Large Structures]]
[[Category: Protein structure initiative]]
[[Category: Vibrio parahaemolyticus RIMD 2210633]]
[[Category: Psi-2]]
[[Category: Duggan E]]
[[Category: Structural genomic]]
[[Category: Joachimiak A]]
[[Category: Vibrio parahaemolyticus rimd 2210633]]
[[Category: Moy S]]
[[Category: Vpa0982]]
[[Category: Tan K]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 15:01:36 2008''
Retrieved from "https://proteopedia.org/2qip"