2rdm: Difference between revisions

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[[Image:2rdm.jpg|left|200px]]


<!--
==Crystal structure of response regulator receiver protein from Sinorhizobium medicae WSM419==
The line below this paragraph, containing "STRUCTURE_2rdm", creates the "Structure Box" on the page.
<StructureSection load='2rdm' size='340' side='right'caption='[[2rdm]], [[Resolution|resolution]] 1.76&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RDM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RDM FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.76&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_2rdm|  PDB=2rdm |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2rdm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rdm OCA], [https://pdbe.org/2rdm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2rdm RCSB], [https://www.ebi.ac.uk/pdbsum/2rdm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2rdm ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2rdm TOPSAN]</span></td></tr>
</table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rd/2rdm_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2rdm ConSurf].
<div style="clear:both"></div>


'''Crystal structure of response regulator receiver protein from Sinorhizobium medicae WSM419'''
==See Also==
 
*[[Response regulator 3D structure|Response regulator 3D structure]]
 
__TOC__
==About this Structure==
</StructureSection>
2RDM is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Sinorhizobium_medicae_wsm419 Sinorhizobium medicae wsm419]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RDM OCA].
[[Category: Large Structures]]
[[Category: Single protein]]
[[Category: Almo SC]]
[[Category: Sinorhizobium medicae wsm419]]
[[Category: Burley SK]]
[[Category: Almo, S C.]]
[[Category: Gilmore M]]
[[Category: Burley, S K.]]
[[Category: Groshong C]]
[[Category: Gilmore, M.]]
[[Category: Hu S]]
[[Category: Groshong, C.]]
[[Category: Meyer AJ]]
[[Category: Hu, S.]]
[[Category: Patskovsky Y]]
[[Category: Meyer, A J.]]
[[Category: Rodgers L]]
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
[[Category: Sauder JM]]
[[Category: Patskovsky, Y.]]
[[Category: Toro R]]
[[Category: Rodgers, L.]]
[[Category: Yan Q]]
[[Category: Sauder, J M.]]
[[Category: Zhan C]]
[[Category: Toro, R.]]
[[Category: Yan, Q.]]
[[Category: Zhan, C.]]
[[Category: New york structural genomix research consortium]]
[[Category: Nysgxrc]]
[[Category: Plasmid]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Structural genomic]]
[[Category: Unknown function]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 16:41:40 2008''
Retrieved from "https://proteopedia.org/2rdm"